Acropora millepora: 114971965
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Entry
114971965 CDS
T06134
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease 2-like 1 protein
KO
K04986
polycystin 2
Organism
amil
Acropora millepora
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amil03037
]
114971965
04040 Ion channels [BR:
amil04040
]
114971965
Cilium and associated proteins [BR:
amil03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
114971965
Ion channels [BR:
amil04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
114971965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
EF-hand_7
EF-hand_1
EF-hand_6
Fer4_24
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
114971965
NCBI-ProteinID:
XP_029208331
LinkDB
All DBs
Position
5:complement(18859746..18875073)
Genome browser
AA seq
907 aa
AA seq
DB search
MSGSAKRRARGGIGSQASLGTNLNDELEMHEKSRPSSAHSRNAWSDEPLGGGHDEIDFSP
RAPASAALDLPSAMEREPVKLQTRVPADVRAPGTKNVPVGCWTRFKRIVRGLWRTRQTED
TDSDPESHVKTTLRELIIYLVFITILCILTFGMTNSTMYYYTKVMRDLFVETTMTNRNAF
KDITTMKEFWMYMNGPLSEGLYWEQYYNNENVSEEDLGFIYFENKILGRPRIRQLRVKND
SCVVHDDFKSVIKDCYAPYSPGAEDTSPFGVGEGMNGTAWEYKTEEELEGRSHWGRITSY
SGGGFTLLLEATKAKTEALIDKLKKNLWLDRGSRAVFIDFTVYNANINLFCIVKLLFEYP
ATGGCIPSFNFRTVKLIRYVNTMDHFVMACEGIFILFIIYYTIEEILEIKKHRLKYFKSF
WNVLDIIVIFLGYVAIVXNLYRTVTVSDLLKGLLANNKQYANFDSLGFWQTQFNNMVAIA
VFFAWIKVFKYISFNKTMTQLSATLNNCAKDVGGFAVMFFIIFLAYAQLGYLVFGTQVRD
FSTFPDAIFTLFRIILGDFDFHALEAANRVLGPIFFITYVFFVFFVLLNMFLAIINDTYA
EVKSNIASQKSEFEIGDYFKKGYQKMLDRLSFKREKIVDIQKALKSADVNQDNKLDFEEW
RANLKSRGHADAEIEAVFAKYDLDGDRILDEEEQRKMQEDLEGQKAELNDEIEEMERAKE
TKSARPKSAASFAGSDDSDDDRESTGGLSARAGSALARPSAGGGGVSYEEFNVLSRRVDR
MEHSIGSIVSKIDAVLVKLEAMEKAKLKRRETMAKLLDSIADSDRAERSDRDLKRDQMEK
LVREELERWDSEASMNRGESPAGSRAATAKSSRGSPSRASQASAVSGRMSDRDRDGASQV
FKDQTNV
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatccgctaaacgccgtgctagaggcggcattggttcacaagcgagccttgga
actaacctaaatgatgaactggagatgcacgagaagagtcgtccttcgtcagcccattca
agaaacgcctggtccgatgaaccactcggcggaggacatgatgaaatagatttttctcct
cgagcgccagcatctgccgctcttgatctgccttccgccatggagagagaaccggtcaag
cttcaaacgagagttcccgcggatgtccgcgctccgggaacgaaaaacgttcccgttggt
tgctggacacgttttaaaaggatcgttagaggtctatggaggacacggcagacagaagac
actgactctgacccagagtcacatgtgaaaaccacactgcgtgaactcataatctatttg
gtgttcatcactatcctgtgcattttgacatttggaatgacaaactcaaccatgtactac
tacaccaaggttatgagagacttgtttgtggaaacaacaatgacgaacaggaatgcattc
aaagatatcacaacaatgaaagaattctggatgtatatgaatggcccactgtcagaaggt
ttgtactgggagcagtattataacaatgagaatgtatcagaagaagacctgggattcatc
tactttgaaaacaaaattcttggccgaccccgtatcaggcagctgcgtgtgaagaatgat
tcctgcgttgtccatgatgacttcaagagtgttatcaaagactgctatgcaccatactca
ccaggagctgaggacactagtccctttggtgtgggagaaggcatgaatggaacagcatgg
gagtataaaactgaggaggagttggaaggaaggtcacactggggaaggattaccagttac
agtggaggagggttcactcttcttctggaagccactaaggctaaaaccgaggctttgatc
gacaagctgaagaaaaacctctggttggatcgtggttccagggcggtgtttattgacttc
acagtttacaacgccaacatcaacttgttctgtattgtaaaactgctgtttgaatacccg
gccactggcggttgcattccatcgttcaattttcgtacagtgaaattgattcgttatgtc
aacactatggatcactttgtgatggcgtgcgagggaatctttatcctcttcatcatttac
tacaccattgaagagatcctggagattaagaagcacagactcaagtacttcaagagcttc
tggaatgttctggatattattgtaattttcctgggatacgtggcaattgtgnttaacttg
taccgtacggtcactgtgagtgatttgttgaagggactgttggccaacaacaagcaatac
gcgaactttgactcgcttggcttttggcagacacagttcaataacatggttgccattgct
gtgtttttcgcgtggatcaaggtgttcaagtacatcagcttcaacaagaccatgacccag
ttgtcggcaactctaaacaattgtgcaaaagatgttggtggttttgctgttatgtttttt
atcatctttcttgcgtatgcgcagttgggttatttggtgtttggtacacaagttcgcgat
ttcagcactttcccggatgccatctttacgctgttccgaatcatcttgggagatttcgat
tttcacgcgttggaggccgccaatcgcgtgcttggtcccatttttttcatcacctacgtg
ttctttgtgttctttgtacttctcaatatgtttttggccatcatcaacgacacctatgct
gaagtcaagtccaacatcgcttcgcaaaagagcgagttcgagatcggagattatttcaag
aagggataccagaagatgttggatagactttccttcaaacgcgagaaaattgttgacatc
cagaaagctctcaagagcgctgatgtgaatcaagataacaagcttgactttgaggaatgg
agagccaatctgaaatcgcgtggtcatgcagatgccgaaatcgaggcagtgtttgccaag
tatgatttggatggggacagaatcctggacgaggaagagcaaaggaagatgcaagaagac
ttagaggggcagaaggctgaattgaatgatgaaatcgaggaaatggaacgcgcaaaggag
actaagagtgcacggcctaaaagcgctgccagtttcgcgggaagtgacgacagcgatgac
gatcgggaatccaccggcgggctgagtgcgcgcgcaggctctgctcttgctcgccccagt
gctggcggaggaggagtctcgtatgaggaattcaatgtcttgagtcgccgtgtggatcgc
atggaacattctatcggcagtatcgtgtccaaaattgatgccgtgcttgtgaaactggag
gcaatggagaaagctaaactcaaacgccgcgagaccatggctaaactgctcgactctatt
gctgatagtgaccgcgcggaacgcagtgatcgagatctgaagcgagaccagatggagaaa
ctggtgcgagaagaattggaacgctgggacagcgaagcttccatgaaccgaggcgagagc
cctgctggttcccgggctgccactgccaagtctagccgtggatcaccgtctcgcgcatcc
caggcctcagctgtctcaggaagaatgtctgaccgtgatcgcgatggagcctcgcaggtc
ttcaaagaccagaccaatgtttaa
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