Acropora millepora: 114972631
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Entry
114972631 CDS
T06134
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
amil
Acropora millepora
Pathway
amil03015
mRNA surveillance pathway
amil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114972631
09123 Folding, sorting and degradation
03018 RNA degradation
114972631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114972631
03041 Spliceosome [BR:
amil03041
]
114972631
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114972631
mRNA cycle factors
Stress granule specific factors
114972631
Spliceosome [BR:
amil03041
]
Complex C
Other components
Complex C specific factors
114972631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RBD_DEAH11
RRM_7
RRM_RdRP1_2
Motif
Other DBs
NCBI-GeneID:
114972631
NCBI-ProteinID:
XP_044181817
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All DBs
Position
9:9576065..9584510
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AA seq
622 aa
AA seq
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MMNSAPGAPNYPIASLYVGDLEADVTEVMLFEKFSTVGTILSLRVCRDIVTRRSLGYAYI
NFLEPAAAERALETMNFDPIKGRPCRISWAQRDPSLRKSGVGNIFIMNLDKSIDNKALYD
TFSAFGNILSCKIAQAEDGTSKGYGFVHFDTEEAAEDAIAKVNGILLNDKKVIATKWMST
RERLEKLDSQPKNFTNVYIKNFGEDMDEERLRELAEKFGHVLSLKVVTDESGCSKGFGFV
SYETPEQAQLAVDDLCGKEWNGQKLYAARAQKKAERQMDLKSQFETNKSERISRYQGVNL
YVKNLDDTIDDGRLREEFSAYGTITSAKVMMDDKHNSKRFGFVCFSSPEEATKAVTEMNG
RVLVSKPLYVALAQRKEERKAQLAAQHMQRIAGLRMQQAAGQPVGQVFPQAGAFYMQPLA
QAGQHPFFTTPIQQVPPFWQQVPPCLQQVPPYWQQVQAQQQAGQHTFTTPMQQVPPCWQQ
VPSCMHLMQPQQQGQPPQVPGGPGGMQAQGQPQGHPGTVAMQSQAPVQQAIHTPGQEPLN
SRVLAAASPQEQKQIIGKRLYPLIQSTHPDEAGEITGVLLEIDNAELLHMLESREALADK
IQEVVSVLRAHSAKEKSEDIKN
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattctgctcctggcgccccaaattatccaattgcttctctgtacgttggtgat
ttagaagcggatgtcactgaggttatgctgttcgagaaatttagcacagttggaacgatt
ttgtcgctcagagtgtgccgcgatattgtaactcggcgttctttgggttatgcttacata
aattttctggaaccggctgctgccgaacgagctctcgaaaccatgaatttcgatccgatc
aagggaagaccttgccgaatctcgtgggcacagcgagacccttctcttcgaaagtctggt
gtcggtaacattttcatcatgaatcttgataaaagcatcgacaataaagcgttgtacgac
acctttagtgccttcgggaatatcctgtcttgtaagattgctcaagcagaggacggtacg
tccaaaggatacggctttgttcacttcgacaccgaggaagccgcggaagacgctattgca
aaagtgaacggcatattgctgaacgacaagaaagtgattgctaccaaatggatgtctact
agggagcggctggaaaagctggatagccaacccaagaacttcaccaatgtctatatcaag
aactttggcgaggacatggatgaagaacgactcagagagcttgctgaaaagtttggacat
gttctaagtctgaaagtagtgactgacgagtctggttgctccaaagggtttggatttgtc
tcctatgaaacacctgaacaagctcaactggcagtggatgatctgtgtggaaaagaatgg
aatggtcagaagctgtatgctgcaagggctcagaagaaggctgagagacagatggatctc
aagtcccagtttgagaccaacaagagtgagcgcatcagtcgttaccaaggtgtgaacttg
tatgtcaagaacttggatgacaccattgatgatggccgtcttagagaggagtttagtgca
tatggtaccatcactagtgccaaggtcatgatggatgacaagcacaactccaaaaggttt
ggttttgtttgtttttcatcacctgaagaagccaccaaagcagtcactgaaatgaatggc
agggttttagtgtccaagccactttatgttgccctggcacagcgcaaagaggaacgcaag
gcacagcttgcagcccagcacatgcagcgcatagctggcttgaggatgcaacaggcagca
ggccaaccagttggacaggtgtttccccaagcaggagcattctacatgcagccgttagcc
caggctggccagcatccatttttcacaactccaatccagcaagtgcctcccttctggcag
caggtacctccctgcttgcagcaagtgcctccctactggcagcaagtgcaagctcaacaa
caagctggccagcatacattcacaactccaatgcagcaagttcctccctgctggcagcaa
gtgccttcctgcatgcatctaatgcaacctcaacaacaagggcaaccccctcaggtgcca
ggaggacccggaggaatgcaagctcaagggcagccacaaggacatcctggaactgttgca
atgcagtctcaagctccagttcaacaagccattcatacacctggacaagaacccctcaac
tccagggtgttggcagcagcctcgcctcaagaacagaaacagatcattgggaagcgcctg
taccccttgattcagtcaacacacccagatgaggctggtgagatcacgggcgtgctgtta
gagattgacaatgcagagctgttgcacatgctggagtcccgcgaagctcttgctgacaag
attcaggaagttgtgtctgtactgcgtgcccacagtgccaaggagaagagtgaggatata
aagaattga
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