Acropora millepora: 114972639
Help
Entry
114972639 CDS
T06134
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
amil
Acropora millepora
Pathway
amil03015
mRNA surveillance pathway
amil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114972639
09123 Folding, sorting and degradation
03018 RNA degradation
114972639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114972639
03041 Spliceosome [BR:
amil03041
]
114972639
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114972639
mRNA cycle factors
Stress granule specific factors
114972639
Spliceosome [BR:
amil03041
]
Complex C
Other components
Complex C specific factors
114972639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_RdRP1_2
RRM_7
RRM_5
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
114972639
NCBI-ProteinID:
XP_044181820
LinkDB
All DBs
Position
9:9584437..9592244
Genome browser
AA seq
545 aa
AA seq
DB search
MNPAPGAPNYPIESLYVGNLAADVTEALLFEKFSTVGAVLSIRVCRDLVTRRSMGYAYVN
FQQLAAAERAISTMNLDLIRGRRCRIIWSRRDPSLRKSGVGNIFIKNLDKSIENKALYDT
FSAFGNILSCKIAQAQDGTSKGYGFVHFDTEEAAEDAISKVNGMLLNDRKVFASKWMSRR
EQLEKRGNQPKKFTNVYIKNFGEDMDDDRLKELAEKFGHVLSLKVVIGDSGRSKGFGFVS
YETPEQAQQVLTDLCGKEWNGKKLYAARAQKKAERQMYLKSQFEKKKSERISRYQGVNLY
VKNLDDTIDDGRLREEFSAYGTITNVKVMMDDNHNSKGFGFVCFSSPEEATKAITEMNGR
IFLSKPLYVALAQRKEERKAQLAAQHMQRIAGLRMQQAAGQPVGQVFPQAGAFYMQPLAQ
AGQRPFFSPQMQQVRPRWQPMQPQQQQVRPLGMQGIPGGGQVPCARGMRQAPPRGVPGQQ
PQSTGSGGASQCLGMGQPAQVRRRFGGMQAQRQPFKFGQNVRKTQEAVSVLRAHSVKEKS
EEIKN
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgaatcctgctcctggcgctccaaactatccaattgagtctctgtacgttggcaatcta
gcagcagatgtcactgaggcgttgctcttcgagaaatttagcacagttggtgcggttttg
tctattagagtgtgtcgcgatttagtgactcggcgttcgatgggttacgcttacgtgaat
tttcagcaactggctgctgccgaacgagctatcagcaccatgaatttagatctgatcaga
ggaagacgttgccgtatcatttggtcgcggcgagacccttctcttcgaaagtctggcgta
ggtaacattttcatcaagaatctcgataaaagcatcgagaataaagcgttgtacgacacc
tttagtgccttcgggaatatcttgtcttgtaagattgctcaagcacaggacggtacgtcc
aaaggatacggctttgttcacttcgacaccgaagaagctgccgaggatgctatttctaaa
gtgaacggcatgttgctgaatgacaggaaagtgtttgctagcaaatggatgtctcgtagg
gagcagttggaaaagcgtggtaaccaacccaagaagttcaccaatgtttacatcaagaac
tttggtgaggacatggatgatgatcgactcaaagagcttgctgaaaagtttggacatgtt
ctaagtctgaaagtagtgattggtgattctggtcgctccaaagggtttggatttgtctcc
tatgaaacacccgaacaagctcaacaagtattgactgatctgtgtggaaaagaatggaat
ggtaaaaagctgtatgccgcaagggcccagaagaaggctgagagacagatgtatctcaag
tcccagtttgagaagaaaaagagtgagcgcatcagtcgttaccaaggtgtcaacttgtat
gtcaagaacttggacgacaccattgatgatggccgtcttagagaggagtttagtgcatat
ggtaccatcactaatgtcaaggtcatgatggatgacaatcacaactccaaagggtttggt
tttgtttgtttctcatcaccagaagaagccaccaaagcaatcactgagatgaatggcagg
attttcttgtccaagccactttatgttgccctggcacagcgtaaagaagaacgcaaagca
caacttgcagcccagcacatgcagcgcatagctggcttgagaatgcaacaggcggccggc
caaccagttggacaggtattccctcaagcaggagcattctacatgcagccattagcccag
gctgggcagcgtccattcttctcacctcaaatgcagcaagtgcgcccccgctggcagccc
atgcaacctcaacaacaacaagtacgtcccttaggaatgcaaggtattccaggaggaggg
caagtgccatgtgcaaggggcatgcgccaggcgcctcccagaggtgtacctggtcagcag
ccgcaatcaactgggtcaggaggtgccagccagtgcctgggcatggggcaaccagctcag
gttcgaagacgatttggaggaatgcaagctcaaaggcaaccctttaaatttggacagaat
gtgaggaagactcaggaagctgtatctgtactacgtgcccacagtgtcaaggagaagagt
gaggagataaagaattga
DBGET
integrated database retrieval system
