Acropora millepora: 114975760
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Entry
114975760 CDS
T06134
Name
(RefSeq) collagen alpha-1(I) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
amil
Acropora millepora
Pathway
amil04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114975760
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
amil00536
]
114975760
Glycosaminoglycan binding proteins [BR:
amil00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114975760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
114975760
NCBI-ProteinID:
XP_029211797
LinkDB
All DBs
Position
Unknown
AA seq
1620 aa
AA seq
DB search
MFLCSQELSVAVVLFFVNIQGVFSQDAVSPSTTERIADLVQEFQWSLHELSIETTGMCES
RPLPFSEDQKARDVAYDLSSFDATINATLDSLFPNGVPEEFVLFATVKVQPDNRAELFTI
IDAEQSLSFNLNPVEFEYRRRGRNPLRVGVGKNLADGAWHRVAFAVRGKHVELSLDCSKD
KIRAKKPRGFNPNFSQGAVVRLGGQFKGSLQQLLIAPDVYKVLSYCKDFTPNCDTPLPYA
PFLNGAAQQRNQPSVQVVNNVRYIKGERGTPGSPGVAGSPGPKGAKGNTGTRGNSGSQGS
PGPPGTAGPPGPPGPPGDGIYVRWSRLQGSNEKGPGPVAGGLVVEPPSVPGDPGIRGPRG
QRGVPGLPGESGEKGSQGDPGLPGPPGNQGSRGSPGMTGKPGPQGPDGPRGSPGPIGEKG
DRGLEGIPGMMGHKGPRGLQGARGEKGDKGEAGERGNPGVAGQSGVPGERGPQGETGPRG
PPGPRGLQGNSGERGPPGPPGSTGPPGAPGIQGIQGMKGPPGPPGIGGPPGPVGPKGEDG
KIGLPGFPGSDGVPGYPGIEGPPGPKGDRGAPGVRGPQGYPGLPGAKGNRGKRGPEGEKG
EEGLSGYPGPKGDEGPKGEDGTPGDSGPQGIEGSEGPKGRSGIPGPIGPPGPTGLKGERG
SPGLPGYSGEPGEKGNTGPNGPRGRDGAKGIRGNPGAPGPQGSRGSRGPRGERGSSGTPG
TPGAKGQPGESGVPGDRGNPGPPGPQGDRGQPGTRGPMGLPGKPGLPGFPGPRGETGPQG
KTGPQGPPGMPGGRGPVGERGASGPKGDRGRPGAQGPTGDPGDSGKDGSKGEQGEPGIDG
KDGAPGQPGSAGPKGAMGPPGPTGLKGVEGPVGLPGGQGTQGMRGPPGQPGPQGSPGRPG
RQGPQGAAGEKGSRGEEGPRGEPGPEGKPGLPGKPGEDGPTGPSGEEGDKGAQGPAGIPG
KKGDRGPKGPPGPSGPVGPPGKPGPTGSAGVPGPQGAPGPRGEKGNDGERGLPGPTGVPG
APGVPGPRGIKGERGPSGPQGSQGLPGPRGPPGPAGTKGDQGETGDTGRDGRPGSKGEQG
PKGDLGAPGVPGTPGRAGLAGAKGDRGDPGPQGNPGQRGPSGLPGAKGPMGATGPQGPQG
PPGSQGVKGTPGPDGKDGEPGPPGARGPPGPRGDDGAPGTPGPQGERGPRGFTGADGDPG
DKGDTGAPGPQGPTGPLGSPGTRGDRGAPGERGTPGTSGDPGPQGPPGSQGPRGNPGPKG
DKGLQGPLGEKGDKGWPGFFGPTGVAGPVGDKGDSGPSGPRGFPGPKGDRGEDGPDGPPG
PAGEQGPRGRAGLQGFKGDRGQPGERGDPGNSGSPGPPGPPGDLSSYLSSGQLVSPSRLE
TSTDKGNTRRRRSVDSADADSSESQGLIQSLRDEIESIKRPSGTQTNPARTCKDLFMCNG
KLQDGLFWIDPNHGCSGDAIQVFCNFTAGGQTCIHPDGDTRQAPNKKWKKLSGAEWFSEY
EDGYEISYSGVGKTQLNFLRLLSEKAAQTFNVTCLGSQGCFDSTSNMVEKAIRLQGANDG
LLSLMKDDPSIKITQAQRDWKAVIRVETEDLNQMPIVDFAPGEFLTSNEFGFEVGPICFS
NT seq
4863 nt
NT seq
+upstream
nt +downstream
nt
atgtttctctgttcacaggaactcagcgtagccgtcgtgttatttttcgtcaatattcaa
ggcgttttttcccaggatgctgtgtccccttcaactacagaaagaatcgccgatttggtg
caggagtttcaatggagcttacatgaactcagtatcgagacgactggcatgtgcgaaagc
agaccgctgccgttttctgaagaccagaaggctcgggatgttgcgtatgatctgtcctca
ttcgatgcaacgattaacgcaactttggactcactatttcctaatggtgttcctgaagaa
ttcgttctgtttgccaccgtgaaagtgcaacctgacaaccgggcagagctgtttacgata
atcgacgccgagcaaagcctttccttcaacttgaatcccgtcgaattcgaatacaggcgt
cgagggagaaacccattgcgcgttggggtaggaaaaaatttagcggatggggcgtggcac
agggtggcgtttgcagtcagagggaaacatgtggagttatctctggactgctcaaaagac
aagattcgcgccaaaaagccaagaggatttaaccccaacttcagtcaaggcgctgttgtg
agacttggtggccagttcaagggctcattacagcagctgttgattgctccagatgtgtac
aaggttctttcctattgtaaggatttcacgcccaactgcgatactccgttgccttacgca
cctttcctgaatggtgcggcgcagcagagaaaccagcccagtgttcaggtcgttaataat
gttagatatatcaaaggagagagaggaacccctggttctcctggtgttgcggggtcgcct
ggcccaaaaggtgcaaagggaaacacaggaacaagaggaaacagtggatctcagggttcc
ccaggacctcctggcacagccggaccacccggacctcctgggcccccaggagatgggatc
tacgttcgatggagcagacttcagggatcaaatgaaaaaggtccaggccccgtcgccggc
ggccttgtcgtcgaacctccgtctgtgcctggagaccccggtatccgtggccccagagga
cagcgcggcgtaccgggccttcccggtgaatcgggtgaaaaaggatcacaaggagaccct
ggattgcctggaccccctggtaatcaaggcagccgcggtagcccgggaatgacgggaaaa
ccgggtccgcaaggtcctgacggaccgcgtggttcccccggacctattggagaaaagggt
gaccgtgggcttgaaggtattcctgggatgatgggacataaaggaccgcgggggctgcaa
ggagctcgtggtgagaaaggagacaagggggaggctggtgaaagaggtaacccgggtgtc
gctggacaaagtggagttcctggagagagaggtccgcaaggagaaacaggaccaagagga
ccccctgggccgcgtggattacagggaaattcaggtgaacgaggtcctcctggtccacct
ggatccacgggtcctccaggtgcgccaggaatacaggggattcaaggcatgaaaggacct
ccgggtcctcctggtatcggaggccctcccggtcctgtagggcctaagggtgaagatgga
aaaattggcctgcccgggttcccaggctccgatggtgtaccgggatatcctggaattgag
ggaccaccaggaccaaaaggagacagaggtgcaccaggagtgcgaggaccacagggttac
ccaggtcttcccggagcaaagggaaatcgaggcaaacggggccccgaaggagaaaaggga
gaggagggtcttagcggatatcccggtcccaaaggagacgaagggccaaaaggagaagat
ggtacaccaggagattccggcccccagggaattgaagggtccgagggaccgaaggggcgc
agtggtattcctggaccgataggcccccctggacctacaggactaaagggtgaaagaggc
tccccgggactgccgggatattctggagaacctggagaaaagggaaataccggaccgaat
ggtccaagaggaagagacggtgcaaagggaatcaggggaaatccaggcgctcctggacca
cagggatccagaggaagtcggggtccacgcggtgagcgaggctcttctggtacgcccggg
acgcctggagcaaaggggcaacctggggagtcaggtgtacctggggacagaggaaatccg
ggacctcctggcccccagggggacagaggacaaccgggaactcgtggaccaatgggcttg
ccaggcaaacccggtttaccaggatttcctggcccacgtggagagacgggaccccaagga
aaaactgggccacaaggacctccaggaatgccaggtggtcgaggacctgtaggagaaaga
ggtgcatcgggccccaaaggtgaccgcggacgaccgggagcacaaggaccgacaggagat
cccggagattctggaaaggacggctccaagggggaacaaggtgaaccaggcatcgacggt
aaagatggagcaccgggtcagccgggctcggcaggaccgaaaggtgccatgggaccgccg
ggacctactggacttaagggtgtagaaggaccagttggtcttcctggtggacagggaaca
caaggaatgcgaggacctcctggacaacctggtccccagggatcccctggaaggccaggt
cgccaaggaccacaaggagcagcgggcgagaaaggttcaaggggagaagaaggacctcga
ggggagcctggccccgagggaaaaccgggacttccaggaaaaccaggggaggacgggccg
actggaccgtctggagaagaaggagacaagggtgcacaaggacctgcaggaatacctggc
aagaaaggagatcgagggcccaaggggccacccggaccgagtggacccgttggtcctccc
ggaaaacctggacctaccggctcagccggagtacctggtccccaaggagctcctggcccc
agaggagaaaaagggaatgatggagaacgtggactaccgggaccaacaggggtccccggc
gccccgggcgttccgggaccgcgtggaattaagggtgagcggggtcccagcggaccgcag
ggatcacaaggtttaccaggaccacgcggacctccggggccagcaggaaccaagggtgac
caaggagagaccggggacaccggaagagatggtcggccaggaagcaagggtgaacaaggt
ccaaagggcgatctaggagctccaggggttccaggcacaccggggcgagctggtttagca
ggagcaaagggagatcgaggggatcctggaccacaaggaaacccaggacagcgcggtcca
tcagggctgccaggtgcgaaaggacctatgggtgcgactggaccacaagggccgcagggt
cccccaggctcccaaggtgtcaagggaactccaggtcctgacggaaaagatggcgaacca
ggcccgccaggagcaaggggcccccctggtcctcgtggagatgatggggctcctggtact
ccaggaccccagggagagcgtggcccccgtggtttcacaggtgcagatggtgaccctggc
gataagggtgacacaggagctccaggtcctcaagggcccacaggcccactaggatcaccg
ggaacacgaggagatagaggcgctcctggggaaagaggaacacctggtacttcgggagat
cctggaccacaaggaccaccgggaagtcaaggtccgcgtggtaaccctggtccaaaggga
gataaaggactgcaagggccgctgggtgaaaagggagataaaggctggcccggtttcttt
ggtccaaccggagttgcaggtcccgttggcgataagggtgattcaggcccttccggtcct
cgtggattccctgggccaaaaggagatcgcggtgaagatggacctgatggaccacctggt
cctgctggagagcaaggaccaagggggagagctggtttacagggtttcaaaggagacagg
ggacaacctggagagaggggggacccaggaaattcaggatcacctggccctccgggccct
ccaggagatctcagttcttacctaagcagcggtcagctggtgtcaccaagtagactggag
actagcaccgacaaaggaaacacaaggcgacgtaggtcggtggactcagcagatgcagac
agctcggagtcacagggactcattcagtctctcagagatgagatcgagagtattaaacgg
ccaagcggaacacaaacgaatccagcgaggacttgtaaagatctctttatgtgcaatgga
aaactccaggacggtttattctggatcgaccctaatcacggttgtagcggagatgccatt
caagttttttgtaacttcactgctggtggacagacctgcattcaccctgatggggacaca
cgacaagcgcccaacaaaaaatggaagaaacttagtggagcagaatggttcagcgaatat
gaggatggttatgagatttcttacagtggagttggaaagactcagttgaactttctgcga
ctactgagtgagaaagctgcacagacattcaacgtcacctgcttgggatctcaaggatgc
tttgacagtacgagtaacatggttgagaaggctatcaggttacagggcgcaaatgatgga
ctcctgtcactcatgaaggacgatcccagtatcaagatcacacaggcgcagagggattgg
aaagccgtcatcagggtagaaacagaggatctcaatcaaatgccgatcgtggattttgct
cctggagaatttctgacctcaaatgagtttggtttcgaagttggtccgatttgttttagt
taa
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