Acropora millepora: 114976096
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Entry
114976096 CDS
T06134
Name
(RefSeq) THO complex subunit 2-like isoform X1
KO
K12879
THO complex subunit 2
Organism
amil
Acropora millepora
Pathway
amil03013
Nucleocytoplasmic transport
amil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114976096
09122 Translation
03013 Nucleocytoplasmic transport
114976096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114976096
03041 Spliceosome [BR:
amil03041
]
114976096
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
114976096
Spliceosome [BR:
amil03041
]
Complex C
Other components
EJC/TREX
114976096
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114976096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
114976096
NCBI-ProteinID:
XP_044176473
LinkDB
All DBs
Position
5
Genome browser
AA seq
1647 aa
AA seq
DB search
MAVMIVTSSALKNWEKSGKDEVLRLCKNCVRCKDGELYDSQFECGENDLKRIIYEVLCHV
IQGNLKHDDVISLLSDVAEVHPGSSSLLADLFCILDVESQCAEDKPSRERFLSLVAASVG
VVPEALLKERLDVETLDALGIVPSQKAFNQKYVRTKTKLFYKQQKFNLLREESEGYAKLV
TELGQEISRHVTSSRALENIKSLIGRFNLDPNKTLDVLLDLFECRIELEDFFLPLLKSFM
EKYESSALCHIMGFKFQFYKDQPDLPTPPSLFHLAALLIKHKLLQLDDLYPHLSPSDADI
VTSDTAKIEEAKQEARKMNIAVLAEIAAANNEENSKDNNKENDKPSIAPDNQKFGICEAL
LMVGAWDYAQTILERLPSFAAVSHPAIASGLCKLIHTTVEPLYRRHSSKAARGRPYVPVA
GGPPQCKLFTDLPQNVFPMLLHLGPHLSTDPILMAKILRISKGFMKDHPSVFEDKEQSSP
QVEKVWCGLLTLLDEVLLPSISLLECNSSLAEELWAMMCRFPYELRYRLYGQWKNESYSS
HPRMVLAKAATIKRAKYITKRLTKENVKPSGRQIGKLSHSNPGILFEYLLSQIQKYDNFI
GPVVDSLKYLTPLAYDVLAYCIIEALANPERERLKHEDTNISEWLKSLAVFCGTVFRKYS
IELTGLLQYVANQLKAGKSFDLLVLKEVVQKMSGIEISEEVTAAQLEALSGGELLRAEGG
YFGQIRNTKKSSQRLRDTLLEGKLDLPLCLLMAQQRNGIVFFEDSERHLKLVGKLYDQCQ
DTLVQFGGFLATQLTAEEYESHLPSLEVLGHSYHLTPDVAFFLSRPMFVHQIETKYEDLK
KSVETPKGKQLQQKQILQCYIDAVNTVMEPVFQSARLLQAPKVWNSISPQLYVTFWALSM
FDLYVPTERYEQELNKLKLQLAQLEDNKDMPVSKKKKEKERCSLLAEKLKEELRQQEEHN
QRVMASLKNERDSWLPAKATKSETITQFLQLCMFPRCVFTASDAVYCAKFVHMLHNLKTP
NFSTLLCFDRVFSDISYTVASCTENEASRYGRFLCSMLEIVMRWHGDKKTYEKECGSYPG
FVTVLRATDKRDNDKADHLDYENYRHVCHKWQYKLTKALVVCLESKDYTQIRNTIMVLTK
ILPYYPKVLNLGQALERRIDKICEEEKEKRQDIYVLALGYAGRLKAKKRDMVVEGEFHHK
EKPPLAATPAVSQNEAVTVKQEKTESQSNSSVSAEATSKTTKNAEADVKPKTTVSIKKEQ
DGSKSSSPSTTKSDNASQAQKETAAKSAVGSSNSKSSGASTPSGTTSSRTIQPESPSRNS
SNNKSVTTVSSTSSQPTSKSSSSSSSNSNPKTTKTSSTVKTESNGNGTEVVTTSKKTESG
KQKVKEKEKDKEKDKDSSEKPKEKVKAEKSEKAKEQKSKEKEKERSKSKEKEGKEKTKER
LKDKDKERSGNKSKYSSPAGVAESPKDGEYEKEAKRRKVDGISSPSSQENSPSQLGAGNE
SDSFKSPDNVERKSKVVEYEKEKTTKADRKRSSLEPGEGKEAKRSRKEESDAIIAVSKTS
NSHGSESKPKVKSEPKVKLVRKAASDASPPAKKEKDKDKERDKEKEGKTATSKKKDSRYL
EVKDIESKEEERSKKHHSRSASRSRRT
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcatgatcgtcacttcttctgccttgaagaactgggaaaaatcaggcaaagat
gaagtgttacgattgtgcaagaactgcgtgcggtgtaaagatggagagctgtacgattct
caattcgaatgcggagaaaatgatctgaaacgtatcatctatgaagtactctgccacgtt
attcaagggaatctgaaacatgacgatgtcatttcactgctgtctgatgtcgcggaagtc
catccaggaagctcatccctgctagctgacctgttttgtatcttggatgtagaaagtcaa
tgtgccgaggacaagccaagcagagaaagattcctttctcttgttgctgcctcagtggga
gtagttccagaagctctgcttaaagaacgcctggatgtggagacattggatgcattagga
atcgtcccatcacaaaaggccttcaatcagaaatatgtcaggaccaagactaagctattt
tataagcaacagaaatttaatttattgcgagaagagagtgagggctatgccaaactggtc
actgaactgggtcaagagatcagcagacatgtgaccagctcaagagctcttgagaatatc
aagtctttaataggtcgattcaaccttgatcccaacaaaactttggatgtgcttcttgac
ttgtttgaatgtcgtatagaattagaagacttctttcttcccctgctgaagtctttcatg
gagaaatatgaatcatctgctctttgtcatatcatgggattcaaattccaattttataag
gatcagccagacttacccactcctccctcactttttcatctcgctgcacttctcattaag
cacaaattgttgcaattggacgacctttatccacatctgagtccatcggatgctgacata
gtcactagtgatacagctaaaattgaagaagctaaacaggaagcaagaaaaatgaacata
gctgtattagctgaaatagctgctgcaaataatgaagaaaacagcaaggacaataataaa
gaaaatgataaaccaagcattgctccagataatcagaaatttggtatttgtgaggcattg
ttaatggttggtgcttgggattatgctcaaacaatacttgaaagattgccatcttttgct
gctgtatcacatcctgcaattgcgagtggattatgtaaacttattcatacaacagtggag
ccgctctatcgtaggcattcttctaaggcagctcgtggacgtccttatgtcccagtggca
ggcggcccaccacagtgcaaattatttacagaccttcctcaaaatgtgtttcccatgtta
ctacaccttggcccacatctttcaactgatcctattctcatggctaaaatcctaagaatc
agtaaaggtttcatgaaagatcacccaagtgtttttgaagacaaagagcaaagttctcct
caggttgagaaagtttggtgcggtttgttaaccctgttggatgaagttctgctaccttca
atttcactattggaatgtaactccagtttagctgaagagctatgggccatgatgtgtcgc
tttccatatgaactaaggtatcgcctttatggtcaatggaaaaatgaatcatattccagt
catccaagaatggtgttagcaaaagctgcaacaattaagagagcaaagtacatcacaaag
agattaacaaaggagaatgtaaagccctctggacggcagattggtaaactgagtcacagt
aatccaggcatcttatttgaatatcttctgtcacagattcaaaagtacgataacttcatt
ggacctgttgtggactcgcttaagtacctgacaccacttgcctacgacgttttagcttat
tgtataattgaagctttggcaaacccagagagggaaagattgaagcatgaagatactaac
atctcagaatggctgaaaagtttagcagtattctgtggcactgtctttcgcaagtattcc
attgagctgacgggtctcctccagtatgtggcaaatcagctgaaggctggcaagagcttt
gacttgctagtgcttaaggaagttgttcagaaaatgtcaggaattgagatatcagaagaa
gtgacagctgctcagttagaagctttgtctggaggagaattgctaagagctgagggtggt
tattttggtcagataaggaacacaaagaaatcttcccagcggctgcgtgacacgctgttg
gaaggaaaattagatctacctctctgtctgttgatggcacagcagagaaatggaattgtg
ttttttgaagattccgagcgacatttgaaacttgttgggaagctgtatgaccagtgtcaa
gatacactagtgcagttcggaggtttccttgccacccagttaacagctgaagaatatgaa
tctcatttaccttcgttggaggtgttgggccattcgtaccatttaacccctgacgttgcg
tttttcctctcaaggcccatgttcgtacatcagatagagacaaagtatgaagatttaaag
aagtctgttgaaactcctaaagggaagcagcttcagcagaaacaaattttgcagtgttac
atcgacgccgtgaacaccgttatggaacctgtgtttcaaagcgcacgccttttgcaagcg
ccaaaagtttggaatagcatcagcccgcagttgtacgtcactttctgggcattatccatg
tttgacctttacgtgccaactgaacgctacgagcaagagttgaacaagctaaaactgcag
ctcgcgcagttagaagacaacaaagatatgccagtgagcaagaagaagaaggagaaggaa
aggtgctccctcttggctgaaaaattgaaggaagaactcagacaacaagaggaacataac
caaagagtgatggcatcgctgaaaaacgagagagacagttggctaccagctaaagcgaca
aaaagtgaaaccatcacgcagtttctgcagttgtgtatgtttccacgatgcgtgttcacg
gccagtgatgctgtgtattgtgccaagtttgtacacatgttacacaatttgaaaacgcca
aacttttctacattgctttgctttgacagggttttctctgatatttcgtacactgtggcc
agctgcacagaaaatgaagctagtagatacgggcggtttttgtgctcaatgcttgaaata
gtaatgaggtggcatggggataagaaaacctatgagaaggaatgtgggagctacccagga
ttcgtgacagtcctaagagctaccgacaagagggacaatgacaaagccgatcacttagat
tacgaaaattatcgacacgtctgccacaagtggcagtacaaactcaccaaggccctcgtt
gtgtgtttagagtctaaagattacacgcagattcgtaatacaattatggtgttaacaaag
attttgccgtattatcccaaagttttaaatcttggccaagcgttggagagacgaattgac
aaaatttgcgaagaagagaaggaaaagcgacaagatatttatgttctcgctttagggtac
gctggtcgtttgaaggccaaaaagcgagacatggttgtagagggagagtttcatcacaag
gaaaagcctcctctggcagctacaccggcagtaagtcagaacgaggctgtgacagtgaaa
caagagaaaacggagtctcaatcaaattcatctgtaagcgcagaggcgacaagcaaaaca
acgaagaatgcagaagctgatgtgaaacccaagacaacagtgagtatcaagaaagagcag
gatggttcgaaatcttcaagcccaagcaccacaaaaagcgataacgcgtcccaagctcaa
aaagagactgctgctaaatctgctgtgggctcatctaatagcaaatcctcaggcgccagt
actccaagcgggacgacctcctctcggacaattcaacccgaatcaccgagccggaattcc
tctaataataaatctgtgaccacagttagcagcacttctagtcaaccaacatctaaatcc
tcgtcgtcctcctcgtcaaattccaacccaaagacaacgaaaacctcatccactgtcaaa
acagaaagcaacggcaacgggactgaagttgtgaccaccagcaaaaagactgagagcggc
aaacagaaggtgaaggagaaggagaaagacaaggaaaaagacaaagactcaagtgagaaa
cccaaggaaaaagtaaaggcagaaaaaagcgagaaagcaaaagaacagaaaagtaaagag
aaagaaaaagagcgaagtaagagcaaggaaaaggaaggcaaagaaaaaactaaggaacga
cttaaagataaggacaaggagcgatctggtaacaaaagcaaatactcatcaccagcaggg
gtagctgagtcgcccaaggatggcgagtatgaaaaagaggccaaacgccgtaaggtggac
ggcatttcgtctccgtcatctcaggaaaattctccatcgcagttaggcgcaggcaacgaa
tccgattcattcaagagcccagataacgtagagaggaaatcaaaagttgtggagtacgag
aaggagaagaccaccaaggctgatagaaaaaggtcttcactggagccaggcgaaggtaag
gaagctaaaaggagccgaaaagaagaaagcgatgccattattgcagtttctaaaacgtcc
aattctcatggatcagaaagcaaacctaaagtgaagagcgagcccaaagtaaaactagta
cggaaagcagcatctgatgcctcaccgccagctaagaaggagaaagacaaagacaaagaa
cgagacaaagaaaaggaaggcaaaacagccacgagtaaaaagaaggactcgcgttatctc
gaagtcaaagatatcgaatcaaaagaagaggaacgatccaaaaaacaccactctagatct
gcatcaagaagtcgtaggacgtag
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integrated database retrieval system
