Acropora millepora: 114976272
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Entry
114976272 CDS
T06134
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
amil
Acropora millepora
Pathway
amil03030
DNA replication
amil03420
Nucleotide excision repair
amil03430
Mismatch repair
amil03440
Homologous recombination
amil03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114976272
03420 Nucleotide excision repair
114976272
03430 Mismatch repair
114976272
03440 Homologous recombination
114976272
03460 Fanconi anemia pathway
114976272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amil03000
]
114976272
03032 DNA replication proteins [BR:
amil03032
]
114976272
03400 DNA repair and recombination proteins [BR:
amil03400
]
114976272
Transcription factors [BR:
amil03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
114976272
DNA replication proteins [BR:
amil03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
114976272
DNA repair and recombination proteins [BR:
amil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
114976272
MMR (mismatch excision repair)
114976272
DSBR (double strand breaks repair)
HR (homologous recombination)
114976272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
Motif
Other DBs
NCBI-GeneID:
114976272
NCBI-ProteinID:
XP_029212517
LinkDB
All DBs
Position
3:926525..941421
Genome browser
AA seq
646 aa
AA seq
DB search
MLTEGAIQDILFKPAEQHPQKPIFQILGIKKIQTKSSDGAGNDRYRLVVSDGINLYTSAM
LATQLNDLVISKHIEAKAVVQLDKYICNIIQETRKVLIVLEVSVLKTADEVVGKIGDPKP
INVESKPEQQQQHQNLQQNVSGPVQRNMSDDLHQNQPQRGSAGQVPAQQQSRAGVMGGNK
LGAPVRTGGLASATYGSNQQVSRGGNNPKPVYPISSLTPYQNRWTIRVRVTSKSNIRTWS
NSKGEGRVFNVDFVDESGEIRATGFNDVVDKFYELLEVNKVYYISKCSLKTANKQYSSIK
NDYEMYINNDTIIELCHDPCDLPTIQYNFVSIGDLSNCNGNDIVDILGVVINIDEVSQIT
TKATNRQISKRDIMLLDRSEKSVRATLWGDYAEKFEDHIGKNPVLALKGVKVSEYGGRSL
SVLNSTNIMVNPLDLKEAHSLRGWYMNVGKDTAIESMSGQRSDGSLGAGSYKTLLQVKSE
QLGMGDKPDYFTAKATAVFFKKDNCLYKACPSAECNKKVIEEGDGTYRCEKCNKTHPDFK
YRLILSANLADFSGNQWVTCFQDSAEAILNTSASQIGQMKDSNDEQAYDQIFSEANFKTY
NFRIRAKMETYNDETRLKCSCMGATPLDFQKECRRLIEEIKKLQAL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgttaactgaaggggcaattcaggacattttgtttaagccagcggaacagcatcctcag
aagcctatatttcagatattaggaattaaaaagatccaaaccaagagcagtgatggagct
ggcaatgaccgttataggctcgtggtttcagatggtataaatctctatacttccgccatg
ttagccacccagctcaacgacttagtgatctccaaacacattgaagctaaagctgttgtg
caactggataaatacatatgtaacatcattcaagagacaaggaaagttttgattgttttg
gaagtatctgtgttgaaaactgctgatgaagtggtgggaaagattggagacccaaaacct
ataaatgtggaatccaaacctgagcagcagcaacaacaccagaatctccagcaaaatgtc
agtggaccagttcagcgtaacatgtcagatgacctccatcagaatcaaccacagagggga
tcagcaggccaggtacctgcacagcagcaatccagagctggtgtcatgggaggtaacaaa
ctaggagctcctgtcagaacaggggggcttgcctctgcaacttacgggagcaatcagcaa
gtttcgcgaggaggaaataatcccaaaccagtttacccaataagttcattgacaccatat
caaaacaggtggaccatacgtgtgcgggtaacaagcaaatcaaatattcgtacttggagt
aactccaaaggcgaggggcgtgtctttaatgttgattttgttgatgaatcgggtgaaatc
agagccacaggatttaatgatgttgttgacaagttttatgaactcctggaggtcaacaag
gtgtactacatttccaaatgttccttaaaaactgcaaacaagcagtattcctccatcaag
aatgattatgagatgtatataaacaatgatactatcattgagttgtgtcatgatccttgt
gacttgccaactatccagtacaactttgtcagcattggtgacctgagcaactgcaatgga
aatgatattgttgacattcttggagttgtgatcaacattgatgaagtttcacagatcacg
acaaaagcaactaaccgacaaatatctaagagggatattatgttgttggacagatcagag
aaaagtgtgcgagcaactctctggggggattatgctgagaaatttgaagatcatattgga
aagaatccagttcttgccttgaagggagtcaaggtgtcagagtatggaggtcgttctctg
tcagtactgaactccacaaatataatggttaatccattggatctcaaagaagctcacagc
ctgcgtggatggtacatgaatgttggtaaagatactgctattgagtcaatgtctgggcag
agatcagatggatctctcggtgctgggagttacaaaactttattgcaagtcaagtcagaa
caacttggaatgggtgataaacccgactatttcacagcaaaagccacggcagttttcttc
aagaaagacaactgtttgtacaaggcttgcccttccgcagaatgcaataagaaagttatt
gaagaaggagatggaacttatcgttgtgaaaagtgcaataaaacccatcctgatttcaaa
tatcgcctgattttgtcggcaaatttagcggatttttcaggtaatcagtgggtcacatgt
ttccaggattcagcggaggcaatattaaacacaagcgcaagccaaatcggtcagatgaag
gactcgaatgacgagcaggcctatgatcaaatcttttccgaagccaacttcaagacttac
aatttcagaatccgggctaaaatggagacctacaatgatgaaactcgcctgaagtgttca
tgtatgggtgcaactccattggatttccaaaaggagtgcaggcgacttatagaagagatt
aaaaagcttcaggctctttag
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