Acropora millepora: 114976337
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Entry
114976337 CDS
T06134
Name
(RefSeq) LOW QUALITY PROTEIN: exosome component 10-like
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
amil
Acropora millepora
Pathway
amil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114976337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114976337
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
114976337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
DUF4874
Sec2p
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
114976337
NCBI-ProteinID:
XP_029212610
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All DBs
Position
6:5419994..5440440
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AA seq
850 aa
AA seq
DB search
MADHEEQTNVAGNEALPGIGELSSFSQDSLGAIVEAIKSCGNLPAAGEDHDLYYSFSDFR
EFRAAQGARLLSNIGNLLHHWKVRCHWPSDSFNIDPEGDELLDSLVEANDTILECVDTSL
DEAAGLNKSNKTASVTIAGAPGQQGTPLVSSWNRHKNYATGKTENTYRFLMAKNIQRPQL
KFKDSIDNSNTPFIPIIKSKPNALKPLQSTTSIESKGVPSAIADFVHQARIKAFEGGPLL
NSTAHPYQYELEVFEPPENQMKLCKEQLYEELEKTPYTFVETQQQLEELSQNLSAVTEFA
VDLEAHSYRSFQGFCCLMQISTRDHDYLIDVLELRTELHILNDSFTNPHILKVFHGADMD
IGWLQRDFGIYVVNMFDTGQAARVLNYGKYSLAFLLKKFCDVTANKQYQLADWRIRPLPQ
EMVHYAREDTHYLLYISDRLHNELLKSGNANNNLLQSVYSKSKNVCLKRYEKPLFSSESF
QRVLEKHKKAFNTEQVCAFRLLYAWRDNVAREEDESYGFVLPNHMMFQISQVLPRDPQGV
LACCNPVPTLVKQYVNEIHQLIMQAKELALNTNKGLTGVSSQVDARSTSKQKESTQQRLS
QKSLVDGDQKSNNLLLNGNTPFVSARPSPVGPILASGPPVHTKAKPAVSIFEICHETQLT
DGQKKAAKIKASFGNPFQKFLPLKTPSATTEGKPVTDDPQGREEPDVRNGSNSSVEETGT
LETNAGTKRKVSDDEETPEDLTPLRNKNAAKKPSRKKKRESCEEGSSTSNIHEKEGSVTL
NTFDYSQADYSTFSDHRQNGSADKPIVFNPYRNAKKSKGPRSKVHMNSGQKNFTFSSTKG
SDHKQKLPRR
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccacgaggaacaaacaaacgttgctggcaatgaggctttgcctggaatagga
gaattaagcagcttttctcaggattctcttggtgccattgttgaagccatcaagtcatgc
ggtaacctgccagctgcaggcgaggatcatgatttatactacagcttttcagacttccga
gaatttagagcagcccagggagcaagacttcttagcaacattggtaatctattacatcat
tggaaagtgcgctgtcactggccaagcgacagtttcaacatagatcctgagggtgatgag
ttgctagacagtcttgtggaagccaatgacaccatccttgagtgtgtggacacaagcctt
gatgaggctgcaggcctcaataaatcaaacaaaacagcaagtgtgacaatagctggtgca
cctgggcaacaaggaacacctcttgtgtccagctggaataggcacaagaactatgccact
ggtaaaacagagaatacatatcgttttctcatggccaaaaacatacaaagaccccagctg
aagttcaaagatagtattgacaacagtaatactccctttattccaatcataaaaagcaag
cccaatgcactgaaacctctgcaaagcacaacaagcattgaatcaaaaggtgtgccatca
gctatagctgactttgtccatcaagccagaattaaagcatttgaaggtggacctttactc
aacagcacagcccatccctatcagtatgaactggaagtctttgagccaccagagaatcag
atgaagctgtgcaaagagcaactttatgaagaattggagaagactccatacacctttgta
gaaacacaacagcagctggaagaactgagccaaaacctgtctgctgtcactgaatttgct
gttgacttggaggctcattcatatcggtctttccaaggattctgttgcttgatgcagata
tcgacaagagatcatgattatctcattgatgtcttggagctacgaactgaacttcatatc
cttaatgattcctttacgaatccccatatactcaaggtttttcatggagcagacatggat
attggttggctacaacgagactttggtatttatgtcgtgaacatgtttgacactggccag
gctgctcgagtgctaaactatgggaagtactcattggcattcctgctgaagaagttctgt
gatgtcactgcaaataaacagtatcagttggctgactggagaatacgacctctgccacag
gagatggttcattatgcaagggaagatacacattacttgctgtacatttctgatcgtttg
cacaatgagcttcttaagagcggcaatgcaaacaacaatttgctgcagtctgtttactcc
aaaagtaaaaatgtgtgcttgaagcggtatgagaagccattattttccagtgaatcattt
caacgagtgttggagaaacataaaaaggcatttaacacagaacaggtctgtgcctttcgt
cttctctatgcctggagagacaatgttgctcgagaggaagatgaaagttatggatttgtt
cttccaaatcacatgatgttccagatttcgcaggttttgccaagggatccccaaggggtg
ttagcgtgttgtaatccagtcccaacacttgtcaagcagtatgtcaacgagatccaccag
ttgattatgcaagcaaaggaacttgctctcaatacaaacaagggcttaactggagtgtcg
tcacaagttgatgcacggagcacatcaaaacagaaagaatcgactcaacaaaggttgtca
cagaagtctttggttgatggtgatcagaaatctaataatttactactaaatggtaataca
ccgtttgtatccgcaaggccaagtccagtgggcccgattttagcgtcaggtcctcctgtt
catacaaaagcgaaaccagctgtgtcgatctttgagatctgccacgaaacacagctgact
gatgggcaaaagaaagcagcgaaaataaaggcgtcctttgggaatccatttcaaaagttt
cttcctctgaagactccgtcagcgacaacagaaggtaagccagtcactgatgacccgcag
ggtcgtgaagagcctgatgtgagaaatggaagtaacagctcggtggaagaaacaggcact
ttggaaacaaatgctggcacgaaacgtaaagtatctgatgatgaagagacgccagaagat
ctgacgccattgagaaataagaacgcggctaaaaaaccctcacggaagaaaaagcgcgaa
tcctgtgaagaaggttcatccacttcaaacatccatgagaaagaaggctcagtgaccctg
aatacgttcgactactcccaagcagattattcaacattttcggatcacagacagaatggt
agcgcagacaagccaatagtgttcaatccttacagaaacgccaaaaaatcaaagggacct
cgttctaaagtacacatgaattctggacaaaaaaatttcacgttttcttcaaccaaagga
tctgaccacaaacagaaattgccccgtcgatga
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