Acropora millepora: 114976668
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Entry
114976668 CDS
T06134
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
amil
Acropora millepora
Pathway
amil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114976668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amil03019
]
114976668
Messenger RNA biogenesis [BR:
amil03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114976668
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114976668
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
114976668
NCBI-ProteinID:
XP_029212987
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All DBs
Position
12:12799334..12813772
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AA seq
818 aa
AA seq
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MADKRKLQGEIDRCLKKVTEGVETFDDIWQKVHNATNANQKEKYEADLKKEIKKLQRLRD
QIKTWMASNDIKDKRTLQDNRKLIETQMERFKVVERETKTKAYSKEGLGLAAKVDPATKE
REEARIWITEVLDRLQIEVDHIESEVEQVHAGSRKKKLDRDKQDKVDELQDWATKHRYHS
KQWEMILRMLDNCTIQPDEIKKLQEDMDFYLDCYKEPDFQENDYMYDDFDLEADIASLNT
LATSPTDEDGDVILNHVPLSPSSSIPPNSPGTPGTPTTPGTPGGVNSKITLQNSPRKNSK
NGPTHGNSFSSSSPPRTPFKTANNAQPSFTPTTSATAPTPVVIKASNVTSKVVNSMIHTN
ENHESSNGEEPVQKTVPLSTPPPPVSGYAVAAGAQQNHVDGGPVSPPSSTAPPRMANHVS
SVAPSIPSSLSRPVLIAGNGMDQSIQNNHLPETETAKSSMPEFVSSMASMSITTPPTILT
APTVSQGNSVPQPSPVLSSVLGVKSSTTSVAPASSQSVSTSMTSSLPSNSVPSSAQGPDI
GGFTLSMASPHVSNSGPVLSNSTMSVEDSLVSSSNQTTSILSGSHLMSNPGQTQQPSTSN
SFSSLKSIAAQAVATAGLSNPVPVPTDYSSESRGLLDSSSNQTTDESKAVQETNTAHLQP
LLGVAPLGPVPLNKERCYQLAMLEAAYHHLPLPADSEKVRPFLPRSPYPTPAYHHQHPPQ
HVDSIEFFQRLSTETLFFIFYYQEGTRAQYLAAKALKKQSWRFHTRYMMWFQRHEEPKAI
TDEYEQGTYIYFDYEKWGQRKKEGFTFEYRYLEDKELP
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaacgaaagcttcaaggggaaattgaccgttgcctaaagaaggttacagaa
ggggtagagacgttcgacgatatttggcagaaggttcacaatgctacaaacgccaatcag
aaagaaaaatatgaagcagatcttaagaaggaaatcaagaaactacagcgattacgggac
cagattaaaacatggatggcctcgaacgatatcaaggacaaacgaactctccaagacaac
agaaagctcatcgagacgcaaatggaaagattcaaagttgttgagagggaaaccaaaaca
aaggcctactccaaagaaggccttggactagctgcaaaggtagatcctgccacaaaagaa
agagaggaggccaggatctggataactgaagttcttgacagattgcagatagaggtggac
cacattgagtcagaggttgaacaagtgcatgctggttccaggaagaagaaacttgataga
gataaacaagataaagtggatgagcttcaagactgggctaccaaacatcggtatcatagc
aagcaatgggagatgatccttcggatgttggacaattgtacaatacaacctgatgagata
aaaaaattgcaggaggacatggatttttacctagactgctataaggaacccgactttcaa
gaaaacgattacatgtatgatgactttgaccttgaagcagatattgcatcattaaacacc
ttggctacatcacccactgacgaagatggagatgttattcttaatcatgttcctctgtct
ccaagttcatcaataccacccaactcgcctggaacaccagggaccccaaccactcctgga
acacctggaggagttaactctaaaattactctgcagaattcaccaaggaaaaactcaaag
aatggacccactcatggaaatagtttctcaagttcttcaccacctcggacaccttttaaa
acagctaacaatgcccagccttcatttacaccaacaacatcggcaactgcaccaactcca
gttgtcattaaagccagcaatgtaacatctaaagtggtcaactcaatgatccatacaaat
gagaatcatgagtctagcaatggagaggagcctgtgcaaaagactgtgccattaagcact
cctcctccacctgtatctgggtatgctgtggcagctggtgcacagcagaaccatgttgat
ggtgggccggtgtcaccaccatcctcaactgcgcctcctcgaatggcgaaccatgtgtct
tcggtggctccatctattccaagtagtttgtcaaggcctgttttgattgctggaaatggc
atggatcaatctattcagaacaatcaccttccagaaactgaaactgccaagtccagcatg
cctgaatttgtgtcatccatggcctccatgtccatcacaactcctccaacgatattaaca
gcacctactgtatctcaaggtaattctgtgccgcaaccatcacctgttcttagttcagtg
ttaggagtcaagtcttcaacaacttcggttgcaccagcatcttcacagtctgtgtcaaca
agcatgacatcttcccttccttccaattctgtaccttcttctgcccaaggtccagacatc
ggtggttttactttatcgatggcgtcgccgcacgtctcaaactcaggtccagttctttcc
aactccactatgtcggtggaagattctttggtatcgtcatctaaccaaacgacttcgatt
ctgagtggttcccatctcatgtccaatccaggacaaactcagcagccttctacatccaac
tctttttcgtccctgaagtcaatagcagcgcaagcagttgccacagcaggactaagcaat
ccagtcccagtgccgacagactacagttcagaaagtagaggcctgcttgactcaagcagt
aatcagacaacggatgagagcaaggcagttcaagagaccaatacagcacatcttcagccc
ctccttggcgtagcgcctttaggtcctgtacccttgaacaaggagagatgttatcagtta
gctatgctggaggcagcttaccatcatctacccttaccagcggactctgaaaaagtcagg
ccttttttaccacgcagtccgtaccccaccccagcttaccatcatcagcatcccccacaa
cacgtagactcgattgaattctttcagagactgtccactgaaacgctgttcttcattttc
tattatcaagagggaacgagagcacagtatttagcagcgaaagccttgaaaaaacagtcc
tggagatttcacacccggtacatgatgtggtttcaaagacacgaagaacccaaagcaatc
actgacgagtacgagcaaggaacctatatctattttgactacgaaaaatggggtcaacgg
aaaaaggaaggcttcacgttcgagtacagatacctagaagacaaggaactgccttag
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