Acropora millepora: 114976702
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Entry
114976702 CDS
T06134
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
Organism
amil
Acropora millepora
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
IZUMO
Motif
Other DBs
NCBI-GeneID:
114976702
NCBI-ProteinID:
XP_044169175
LinkDB
All DBs
Position
Unknown
AA seq
1743 aa
AA seq
DB search
MFGSGSVPFHYLQGIKLSLYSPEEMKKLSVKKITNPETFDALLNPSLGGLYDPALGPTDK
DDLCGTCSQNYIFCPGHFGHLEFPLPVYHPMFFKVLQQILRASCFQCSHLLIPRIARHLF
LSQMKVLDYGLISVAEELRVVACNASDEEKDKDTDDGQDDPVCHALDKCVKNQLKNVDKK
EARGRAVAKNITNFRHQIIKDFMSTYMTFKTCFCPVCGTPSRDVRSEHNTSLFLKGLSFR
MANKWLLSRTHKERDSDAHDGSEEKHKDIQEVPKGDEKDSQIKELMQQIYLTPTEAKEQI
FKIWENHGDFLDILLGAYPSPTARRKRSSADMFFFEVFPVPPSRFRPLSTLGEKRFENPQ
SGNLVKILKDCALLKECLANVKNSATTEEEQQPAIVKDEVKPAKKKKIFGKSAPDINQGK
SPMERLHNAWLKLQTDVNCCIDSDLDKLSSVKFPGIRQILEKKEGLFRKHMMGKRVNYAC
RSVISPDPYMNVNEIGIPEVFALKLTYPQPVTHWNVKELRQAVINGPLQHPGATLVEQED
GKRTLLSMTNPNQREAIAKRLLTPSTGVKTVSPCKKVYRHLQNGDVLLLNRQPTLHRPSM
MAHKVRVLRGEKTIRLHYANCKSYNADFDGDEMNAHFPQNELARAEAYHLASTNYQYLVP
KDGTPLGGLIQDHIVAGVRMTVRGRLFSRSDYQQLVYSALSFKNIKIKLLKPCIYKPRQL
WSGKQVVSTVLINLIPPEVDRLSICGKAKIAGKNWMNGNLRNQSLGIPLLKGDDMSEAQV
VIRQGELMCGVLDKAHYGPTPFGLVHCCNELYGGAMSSDLLTALARVFTSFLQIHGFTLG
VEDILVDEKADKKRRKLMKNAAGTGDEAAMGALGLPEDCGRHVLEQKLREVHHNKDGYEM
KELDLSMKKKTDHYQDLINKACIPLGLLKRFPDNNLQLMVQAGAKGSSVNCMQISCLLGQ
IELEGRRPPIMLSGRSLPSFLPYDTSPRAGGFVDGRFLTGIRPQEYFFHCMAGREGLVDT
AVKTSRSGYLQRCLIKHLEGLQVGYDLTVRDSDGSVVQFYYGEDGLDVMKTPFLSEKQFP
FMVDNFKIFLDQVNPHELLPHLEADKAAKLEEKIGKWKRKHAGDQQNRTSPFLCFAQDNM
KARRNAESEEETQKYGRTKADLKLFKMWRKAPVDVRERYTKKTAGCPDPVLSKLQADRHF
GAVSEKFSDSVMNYTEVNPDKCLTSEEFEENDKLPAFKFRNLMYLKAFRALAEPGEAVGL
LAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMTASERIKTPRMDLPVKPGSK
AKKRAKRLQRTFTKVRLAQVLESVDVWESLSSNEESNRERLHRVRFNFLSESSYKDEFCV
KAGRILHYMESHFINKLTKAILKEFHVKNSTSVIDFSKDNDQPRENNDKAVAQDDDDDNA
ELSDEEAADGDANEAKQRQRRQQHASYEAPDEDEENELTAFQHEEDQDTNEVSSIRTESI
YGDEGSVNDVSSREEIEEATRQSRVYSSRVERVQLLNDHVASYTYDVDKEEWCEVCLKFP
VADFKIGVASIVEKLANQSVVYEIPGINRCFLIEDKDEAVLKTEGVNVQAAWKHEDILDL
TKIYTNDIQAMANTYGIEAAGKVIRQELKSVFSAYGIQVDPRHLSLVSDYMTYEGTVKAF
NRVALDSNSSPFQKMSFETTTHFLRGAVLTGDTEKLSSPSSRLVVGRVVGSGTGCFELMQ
PLF
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttcgggttccgtaccttttcattacttacagggtatcaaactgtcgttgtat
tcgccagaagagatgaagaaactcagcgtgaaaaagataacgaacccagaaactttcgac
gcattgctaaacccaagcttgggaggtctttatgatcctgcacttggcccaacagataaa
gacgacttgtgtggaacttgttcacagaattatattttctgtcctggacactttggacat
ttggaatttccattgcccgtgtatcatcctatgtttttcaaagttttgcaacagattttg
agggcgtcttgttttcagtgcagccatcttcttatcccaagaattgcgagacatcttttc
cttagccaaatgaaggtgctggattacggcttgatttcagttgccgaagagctcagagtt
gtagcttgcaatgcttctgatgaagaaaaggacaaagatactgatgatggacaagatgat
ccagtgtgccatgctctggacaaatgtgtaaagaatcagttaaagaacgtagacaagaaa
gaggccagaggccgagcagtggccaaaaatatcacaaacttccgacatcaaattatcaaa
gattttatgagcacttacatgacttttaaaacatgtttttgtccagtttgtggtacccct
tcaagggatgttaggagtgaacataacacttctttatttctgaaagggctgtctttcaga
atggctaataagtggttactgtctagaacacataaagaaagagatagtgatgcacatgat
ggctctgaggaaaaacacaaagatatccaggaggttcccaaaggagatgaaaaagatagt
caaataaaagagctcatgcagcagatatatctaacaccaacagaagctaaggaacaaatt
tttaaaatctgggaaaaccacggtgactttcttgacattctacttggagcatatccttcg
cctacagccagaaggaagcgttcatcagcagacatgttcttttttgaagtcttccctgtt
cctccctccagatttagaccactttcaacacttggtgaaaagcgctttgaaaatccacaa
agtggaaacctggtcaagattttgaaagactgtgctttattaaaggagtgtttggcaaat
gttaaaaattctgctacaacagaagaggaacagcagcctgcaatagtgaaagatgaagtg
aaacctgcaaagaagaagaaaatctttggtaaaagtgctccagatattaaccaaggaaag
tcaccaatggagagacttcacaatgcctggctaaagttacaaacagatgtgaattgttgt
atagacagtgatctggataaattatcatcggtcaaatttccaggaataagacagattctt
gagaaaaaggaaggattgtttcgtaaacacatgatgggcaaaagagtcaactatgcttgt
cgatctgttatttcaccagacccttacatgaatgtgaatgaaatcggaattccggaggtt
tttgctttgaaattaacttatcctcaaccagttactcattggaatgtcaaggaattaaga
caagcagtcatcaatggtccccttcaacaccctggcgctacccttgtggaacaagaagat
ggcaaacggactctgctcagtatgactaatccgaatcaaagagaagccattgccaagcgt
cttctcactccatccacaggcgttaaaacagttagcccttgtaaaaaggtttatcggcac
cttcaaaatggtgacgtcttgttgttaaacaggcagcccactttacacagaccgagtatg
atggcacacaaggttcgcgttctccggggagaaaaaaccatccgacttcactacgctaat
tgcaaatcgtataacgctgactttgacggcgatgagatgaacgcccactttcctcaaaat
gaattggccagagcagaggcctaccacttagccagcactaattaccaatatttggtaccc
aaagatggaacaccgttgggcggacttatccaagatcatattgtagctggagtgagaatg
acagtaagaggccgattattcagcaggtccgattatcagcagcttgtgtacagcgctctt
agttttaaaaatatcaaaataaaattattgaaaccatgcatctataaacctcgtcaactc
tggtcaggcaaacaggtagtgtctacagttcttatcaatctgattcccccagaggtcgac
cgtttgagcatttgtggcaaagcaaaaatagcaggaaagaactggatgaacggaaaccta
aggaatcagtctctcggaatccctttgttgaaaggcgatgacatgtcagaagctcaggtg
gtgatccgccagggtgagctaatgtgtggcgtgttggacaaagcgcattatggacctaca
ccatttggtttggttcactgctgtaatgagctttatggcggagctatgtccagcgacctt
ctcactgccttagcgagagtcttcacttcatttctgcaaatccacggctttacgctcggt
gtcgaagatattttggttgatgaaaaagctgacaagaaacgacgaaagcttatgaaaaat
gccgcaggaactggcgacgaggcagccatgggagctcttggccttcccgaagattgcgga
aggcatgttttggaacaaaagctacgggaggttcaccacaacaaagatggctacgagatg
aaagaactcgacctcagcatgaagaagaaaacagaccattaccaagatctcatcaacaaa
gcctgtattcccttgggtttgctcaagagatttccagacaacaatcttcaattgatggtt
caagcaggtgccaagggatcctcagtgaattgcatgcagatatcgtgtcttcttggtcag
attgaactcgagggacgtaggcctccaatcatgctcagcggcaggtccttgccgtctttc
ctgccttatgataccagtccaagagctggtggcttcgtagacggccgcttcttaacgggg
attcggcctcaagagtatttctttcactgcatggctggacgagagggcctcgtggacaca
gctgtcaaaaccagtcgaagtggttacctgcagcgatgtcttatcaaacacttggaaggt
ttacaagtcggttatgatctgaccgtacgcgatagcgatggctcagtggtgcagttttac
tatggcgaggatggtctggatgtcatgaaaacgcctttcctgtcggagaaacaatttcct
ttcatggtggacaattttaagatcttccttgatcaagtgaacccacacgaacttcttcct
catcttgaagcagacaaggcagcgaagcttgaggaaaagattggcaagtggaagaggaag
catgcaggtgatcaacaaaacagaacgtccccgttcctttgctttgcacaagacaacatg
aaagccagacgcaatgcagaatcagaggaagaaacgcaaaaatatgggcgcacaaaggcg
gatctaaaactgttcaaaatgtggaggaaagcgcccgtagacgttcgtgaaaggtatacc
aagaaaaccgcaggttgcccagatcctgtgctgtccaagcttcaagctgacaggcatttc
ggtgcagtgtcagaaaagttcagcgattctgtcatgaattacacagaagtcaatcctgac
aaatgtctgacttcagaggagttcgaagaaaatgacaaactaccagcgttcaagttcagg
aacctcatgtaccttaaagctttccgagcccttgcagaaccaggagaggctgtgggattg
ttggctgctcagtccatcggtgaaccatccacgcagatgacacttaacacttttcacttc
gctggtcgcggcgagatgaacgtcacactgggaattccaagactaagggaaatattgatg
acagcgagcgagcgtatcaagacaccaaggatggaccttccggtcaaaccagggtctaaa
gcgaagaagcgtgcaaaacgattgcaaaggacattcaccaaagttagattggctcaggta
ctggagtcagttgatgtttgggaatctttatcgtctaacgaagagtcaaacagggagcga
ttacaccgtgtccggttcaactttctgagtgagtcgtcctataaggacgaattttgtgtg
aaagcgggacggattcttcattacatggaatcccatttcatcaataagttgaccaaagcc
atcttgaaagagttccatgtgaaaaatagcacaagtgtaatcgatttttcgaaggacaat
gaccagccgagagagaacaacgacaaggctgtagcccaagatgatgatgacgataatgcc
gagctgtcagatgaggaggccgctgatggcgacgctaacgaagccaagcaaagacaaagg
cgacaacagcacgcaagctacgaggcccctgacgaagatgaggaaaatgaacttacggca
ttccagcatgaagaagaccaagataccaacgaggtttcaagtataaggacagaatcaatt
tacggggacgaagggagcgtcaatgatgtatcaagtcgagaagaaatcgaagaagccaca
cgccagtcgcgcgtttacagttcgcgagttgagcgtgttcaactgcttaatgatcacgtg
gcttcatacacttatgacgtcgataaagaagagtggtgtgaagtttgcttaaagtttccc
gttgctgacttcaaaataggagtagcttccatagttgaaaaactggccaatcagagtgtt
gtttacgaaataccaggcattaaccggtgctttctgatagaagataaggacgaagcagtt
ctgaaaacagaaggcgttaacgtacaggctgcttggaaacatgaggatatacttgacctg
acaaagatatatacaaacgatattcaagccatggccaatacgtatggtattgaagcagct
ggaaaagtgataagacaagaattgaaaagcgtcttcagtgcttatggaattcaagtggat
ccacgccacctcagcctcgtgtccgactacatgacgtatgaaggaaccgttaaggccttc
aaccgcgtcgcactcgattcaaattcttctccttttcagaaaatgagttttgaaaccaca
acgcacttcctgcgcggagccgttctgactggggacacagagaagctgtcttcaccttcg
tctcgtctggtcgttggtcgtgtcgttggcagtggtacaggctgctttgagttaatgcag
ccgctgttttga
DBGET
integrated database retrieval system
