Acropora millepora: 114977033
Help
Entry
114977033 CDS
T06134
Name
(RefSeq) LOW QUALITY PROTEIN: cholesterol transporter ABCA5-like
KO
K05648
ATP-binding cassette, subfamily A (ABC1), member 5
Organism
amil
Acropora millepora
Pathway
amil02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
114977033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amil02000
]
114977033
Transporters [BR:
amil02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
114977033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_23
AAA_29
AAA_22
AAA_30
RsgA_GTPase
BPD_transp_1
MukB
Motif
Other DBs
NCBI-GeneID:
114977033
NCBI-ProteinID:
XP_029213457
LinkDB
All DBs
Position
12:22378395..22404055
Genome browser
AA seq
1690 aa
AA seq
DB search
MGVLNQTRYLLQKNFIIKKRNKRETLQELLIPLWWTILLLVLKKAIYKTGELPAVSDRQI
PTMDIFKLVPRGNTSKSLVGYVTNGLSKASLTIELLKNSSQSEERYVEFNTTDSMLDYYR
KYSESRGFKMGIEFTKGKNQGLAYTLRLSKKNFPKADNKLVGQQQCRNMRKLFILSDCQA
YSYIVSQEAALQARIDAAITTIEANLSHYVVPNIEAQMMPKDSYTSSMQTFSLTSSIYLV
LAFVPYITALLVSLVQEKEQKQKELMRIMGMSDLAYWLSWLFTYAIILFFSVLVLNAILV
FGGSMGNSNYFVMVIIFLLYSISIIVIGFLMTPFFKVAKTAGAVASMLTTLLGLIAIPLI
LVDVARPVRWALSLFSPTAFAVLVSQASDNEGLHFQNLTTKGDFPPINYVIMLIVDIILY
FLLALYFDAVIPAEYGQRRHPLFIFRLSFWKSCLFCAGENGKAQTRKMSTLEWDRSEDIE
AVHGDMERNKAISIQCLRKVFHGKEQDTVAVDGVSMYIYEGQITALLGHNGAGKTTLIAL
ITGMVPVTDGYATVYGMDITDPNQMKEIRKLIGVCPQQNVIFDFMTVQEHLEFYYGLKGI
APNARDAKVTQLLKDIDLIHVKDTLSRNLSGGQKRKLCVGSALIGDPKVVVLDEPTSGMD
PYSRRLMWTLLQEQSKNKAVVLTTHFMDEADILADYKAILSKGKVRCAGSSLFLKSRFGI
GYHLNMALADNCDTEKLTEIVQSKVQGANVIRHHGRELAFTLPMEQVSNFPDLLQALEAN
SGGSEGCSXPLLGVTSYGVSMTTLEEVFLQLEDTNQETEGETDEFQSFETLTDVCDVVPL
VLQDGATTAPVSAGGQELNQPNLSRNSQKALWKAKQQMLALLKIRWLTTLRSPLKIFFMI
LLPPIFLVVGLVLSTPSKRKDDANTPQSLVLNPELYLKPGGQESYATLALLQNATNHAIG
YIMAYFADYKVATELVTSIADVLNSSLSKTYNLGFKIRQFPAAVNLSQSSPAGLTSSFLL
RFNDTTVHSVPVGVNILGSVLHMNALKSLNQTLFPLETTLLSFPSLKREWTFDISSFFSV
LMIGIAFVVIPGSFAIEVVALRQEKLRHVLRVSGVSSSVYWLQFFIADAIIFLIPSTLLL
ILIPAFKVPSLSPAPAMVCLVVALLLFLPSAILFSYVFSFLFKKWEFAQSVMPQLYLYGS
LVPWLVVSLVDMTSSENTAIIIHYVCTFLIPPYPVYGALYYIDRAYRVKSIEVTFQGGAP
KDVHMTASDYFDWTKHNGIVASLIAPVFHTIVFSLLLYVLDQRDIGALSMKCSCTQGVEC
DCDSTEQQDEDVKQEKERIANVEASPTDLSSFSVVVKDLWKKFGSGIKSKTAVKGLSFGV
ERGEIFGLLGPNGAGKTSSLNMITTDFPPTKGKVYVAGYEISKHPMKAFEHMGYCPQADT
LWSVVTVKEHLQLFARVRGIPWGDVNRVVDHYLSALRITEHADKRSKHISGGTKRKVCFA
NAMLGDPDLLLLDEPSSGMDPSARRFFWNTISKNVKGNCGAILTTHSMEEADALCSRVGI
MVKGQLKCLGSTQHLKSTHGSGYTLEIKLAQTQASGLSSDDAMEQLHNYISQILPGATRS
EVFGGRVTYKVHREGVGALSVIFHQLEKGKETVGIEEYSFSQSTLEQVFLEFAREQDDER
TGAGDAFETK
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgggagttttgaatcaaactaggtatctcctccaaaagaatttcataatcaagaagaga
aacaagcgagaaacactacaagaattgttaattccattatggtggacgattcttctgctt
gtacttaagaaagcgatttacaagacaggagagctgcctgcggtcagcgaccgccaaata
ccaactatggatatatttaagctagtaccgcgaggaaatactagcaaatctcttgttggt
tatgtgacaaatggtctctcgaaagcaagtttgacaatcgaattgctgaagaactcctcc
cagtcggaggagcgctatgtggaattcaacactacggatagcatgttagattactacagg
aaatacagcgaaagtaggggctttaaaatgggaatcgaattcacaaaaggcaaaaatcag
ggattggcatacactttgcgattgagcaagaagaacttccccaaagctgacaacaagctt
gttggtcaacagcagtgccgcaacatgcgaaaactattcattttaagtgattgtcaagct
tatagctacattgtcagtcaagaagcagctttacaagccagaattgatgctgctataact
acgattgaggccaatttgtcacattatgttgttccaaacattgaagcacagatgatgcca
aaagattcctacacttcatcgatgcaaacattctcattaacttcctcaatatacctggta
ctagcttttgtgccgtacatcactgctctgttggtgagcttggtccaggagaaggagcag
aagcagaaagaactgatgcgaattatgggaatgtctgacctggcctactggctttcatgg
cttttcacctatgccattattttgtttttctccgttcttgttcttaatgctatcctagtc
tttgggggctcaatgggtaacagcaattattttgtcatggtgataatttttctcttgtat
agcatatcaatcatcgtgattggctttctaatgacaccattcttcaaggtggcaaaaaca
gctggcgcagtagcatcaatgctgacaactctgttgggattaattgctatacctctcatc
cttgttgatgttgctcgtcctgttagatgggcattgtctttattttctcccactgcattt
gccgtgcttgtttctcaggcatcggacaacgaaggtctacattttcagaatttgaccacc
aaaggagattttccacctattaactatgttatcatgctgatagtggacataattttgtat
ttccttctggccctgtattttgatgctgttattccagcagaatatggtcagcgcagacat
cctcttttcatcttcagactatcattttggaaaagttgcttgttttgtgctggggaaaat
ggaaaagctcaaaccagaaaaatgtccaccttggaatgggacagatcagaggacattgaa
gctgttcatggtgatatggagagaaataaggcaataagcattcaatgtctgagaaaggtt
ttccatggaaaagaacaagacactgtggctgttgatggagttagtatgtatatttacgaa
ggacaaatcacagcactgctgggtcataatggtgcaggcaaaacaacattgatagctttg
atcactggaatggttcctgtcactgatggatatgccacggtgtatggaatggacatcaca
gatcccaatcaaatgaaggaaataagaaaacttattggtgtttgtccacaacagaatgtg
atatttgatttcatgacggttcaggagcatttagagttctactatggcttgaagggaata
gcacctaatgcaagagatgcaaaggtaacgcagctcttaaaggatattgacttgattcac
gtaaaggacacattgtctcgaaatttgagtggaggacaaaaaaggaagctttgtgttgga
agtgcacttattggtgatccaaaggtggtggtattagatgagcccaccagtggaatggac
ccgtattcacggcgcctcatgtggaccttactgcaagagcaaagcaaaaacaaggcggtt
gtacttacaactcatttcatggatgaagctgacattttagcagattacaaagctattttg
tccaaaggaaaagttcgctgtgctggttcctccctatttctcaagagccgctttgggatt
gggtaccatttgaacatggcgctggcagataattgcgacacagaaaagctgactgaaatc
gttcaaagcaaagtgcaaggtgcgaacgtcattcgtcaccatggcagggaattggcgttc
actctacccatggagcaagtatccaattttccagatttgcttcaagctctagaagctaac
agtggtggctctgaaggatgctcangtccattgttgggagtgaccagctatggggtttcg
atgacaacgttagaagaagttttccttcaactggaagacacgaaccaagaaactgaaggg
gaaacggatgaattccagtcttttgagactttgactgatgtctgcgatgtggttcctctc
gtccttcaggatggcgcaacaactgccccagtctcagcgggaggacaagaactcaatcaa
ccaaacctgagtagaaactcacagaaagcattatggaaagcaaaacagcaaatgctggct
ttacttaagattcgatggcttaccacactgcgcagtcctttgaagatatttttcatgatc
cttcttccaccaatttttttggttgtgggtctagtcttgtcgactccatcaaagagaaaa
gatgatgcaaacactcctcaatcgcttgtcttaaatccggagttgtacctgaagcctgga
ggccaagagagttatgccactctcgcacttctacaaaatgcgacaaatcatgccataggc
tacatcatggcgtattttgctgattataaagtcgccactgaattagtgacctccatagct
gatgtgttgaacagttcattgagtaagacttacaacttgggttttaagattcgccaattc
ccggcagcggtcaatttgtctcagtcaagtcctgcaggtttgacctcgagcttcctgttg
aggttcaacgacacaacagttcactctgttcccgttggtgttaacatcctgggatctgtg
ctgcacatgaacgcgttgaagagtctcaatcaaactctatttccactggagacaacactg
ctttcgtttccaagcctaaagcgcgaatggacgtttgacatttcttcctttttttctgtt
ttaatgattggcatcgcctttgtggtaatcccaggaagctttgcaatcgaggttgttgcg
ctaagacaggagaagcttcgtcatgttctccgagtgagcggagtttcctcttctgtttat
tggcttcagttcttcatcgccgatgccattattttccttattcctagcacgctgttgttg
atacttataccagctttcaaggtcccttcattgagccccgctccggcgatggtctgcttg
gttgtagccctgttactgtttcttcccagtgcaattctgttctcgtatgtgttttctttt
ttgttcaaaaagtgggaattcgctcaatcagtcatgcctcaactgtatctttatggatcg
ctcgttccgtggttggttgtatcgttggtggacatgacttccagcgagaatacagctatt
attatccattacgtgtgcacgttcttgattcctccttatccagtctatggagcgctgtat
tacatcgatcgtgcatacagagttaagtccatcgaagtaacctttcagggtggtgcgcct
aaggatgttcacatgactgcaagcgattatttcgattggacaaagcacaatgggattgtg
gcttcacttatagcacccgtgtttcataccattgtgttttctttgctgctttacgtcttg
gatcagcgagacattggtgctctatcaatgaagtgctcgtgtacccagggcgtcgagtgt
gattgtgattctactgagcagcaggatgaggatgtaaaacaagaaaaggagaggatagcg
aatgtagaggccagcccaacggatttgtcctcattctctgttgtggttaaggatctgtgg
aaaaagtttggctcgggaattaagagcaaaactgctgttaaaggcttgagctttggtgtt
gagcgaggcgaaatctttggacttcttggaccaaacggagctggcaaaacgtcttcactg
aatatgattacaactgactttccaccaacaaaaggaaaggtctatgtggccggatatgaa
atcagcaagcatccgatgaaagcttttgagcatatgggatattgcccacaagcggataca
ttatggagcgttgtcaccgtgaaggaacacttgcagctgtttgccagagttcgtggaatt
ccttggggtgacgtcaacagagttgtcgaccactatttgtcggccttaaggataactgag
catgccgacaagaggagtaagcatatttctggaggaacaaaacgaaaggtttgctttgcc
aacgcaatgctgggagaccctgacctgctgttattagatgagccttcctctggtatggat
ccctccgcaaggcgcttcttttggaacacaatcagtaagaatgtgaaaggaaactgtggc
gccattctcaccacgcactccatggaagaagcagacgctttgtgctcacgagttggtatt
atggtcaaaggacagctcaaatgtctcggatcaacgcaacatttaaagagcacccatggc
agcggttataccctcgaaatcaagctcgcgcagacccaggcctcagggttgtcttcggac
gatgctatggagcagttgcataattacatttcgcaaatactcccaggtgcgacgcggtcc
gaagtgtttggtggaagagtgacctacaaggtccacagagagggcgttggagcgttgtca
gttatttttcaccaactggagaaagggaaagaaactgttggaatagaggaatatagcttc
agccaatcgacactggaacaggtttttctcgagtttgcgcgagaacaagacgacgagcgg
acaggagctggtgatgcattcgagaccaagtga
DBGET
integrated database retrieval system
