KEGG   Acropora millepora: 122964066
Entry
122964066         CDS       T06134                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
amil  Acropora millepora
Pathway
amil04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:amil00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122964066
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amil04121]
    122964066
Enzymes [BR:amil01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     122964066
Ubiquitin system [BR:amil04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    122964066
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     122964066
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EIPR1 WDR55 zf-C3HC4_2 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_1st EIF3I Beta-prop_RIG_2nd Beta-prop_WDR36-Utp21_2nd zf-C3HC4 Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd zf-RING_UBOX zf-RING_2 Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR19_1st ANAPC4_WD40 zf-C3HC4_3 WD40_like PEP5_VPS11_N zf-RING_5 zf-C3HC4_4 Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 RING_XB3-XBAT31 WD40_RFWD3 Beta-prop_WDR75_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 zf-rbx1 Beta-prop_SCAP Beta-prop_WDR41 RING_ZNF598 Sina_RING FemAB TRAF3_RING WDR54 zf-RING_10
Other DBs
NCBI-GeneID: 122964066
NCBI-ProteinID: XP_044183432
LinkDB
Position
11:complement(7049843..7071869)
AA seq 664 aa
MSQLSQSSSSTSSAQSRGGRRRKRPHPPVYGGIMNSFSDRNSDFVCPICFDIIDEAFMTK
CGHTFCYECITRSLEESNRCPKCNYIIDKPDQIFPNFLLNELVQKVKERSGQKRGKVTPK
SQLQGSVNGIQEILSGEIEWDLADVNYVLDVLTQKKQQLEADSQAVQHELLKDFLSQVKR
HKQEQLDQLTREVKLIDEDMKRVKEMIATHNRQYPLPVPLTLPGAERLLVNDVDHAVPTT
PTAKTAPLAVGSDVEPSTSHDYPCDQTETAQDGFNGSQHGAKHFLCSTSLASRRKRIHQH
FDDLERCYFSIRQGDFPSDTGTSDALDYFTDSLAKFTKFSGFRCLATLSYASDIYNGSSI
VSSIEFDRDFDYFAIAGVTKKIKVFEYGTVIRDVVDIHCPVNEMVCNSKISSICWSSYHK
GLLASSDYEGTVTLWDAFTGSKTRSFQEHEKRCWSVDFNHVDPKLLASGSDDAKVKLWST
DMEHSVACLEAKANVCCVKFNPESRYHLSFGSADHCVHYYDLRNTTLPITVFKGHRKAVS
YTKFINTEEIVSASTDSQLKLWNISKPHCLRTFKGHINEKNFVGLASNGDYVACGSENNS
LYLYYKGLSKQLLTFKFDTVRSVLEKDKKEDDANEFVSAVCWRTGSNVVVAANSQGTIKV
LELV
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgtcgcagctgtcacagtcgtcaagttcgacctcgtccgcgcaaagtagaggaggacgt
cgacgcaaaagacctcatcctccagtgtatggcggtattatgaattcctttagcgacagg
aacagtgactttgtttgtccgatatgttttgatatcatcgatgaggcttttatgacaaaa
tgtggacatacattctgttatgaatgtataactcgaagcttggaggaaagcaaccgctgt
cccaagtgtaattacatcatagacaagcctgatcaaatattcccaaattttctcttgaat
gaacttgtgcagaaagtgaaagagagatctggccaaaaaaggggtaaagtgactcccaag
tcacagttgcagggttcagtcaatggtattcaagagattttgtcaggagaaattgagtgg
gatttagcagatgtaaattacgtgctggatgtattgacacaaaagaagcaacagctggaa
gcagatagtcaagctgtgcaacatgagcttctaaaagattttctgtcacaagtcaagcgg
cataagcaagagcaattggatcagttgacaagagaagtcaagctcattgacgaagacatg
aaacgagtaaaagaaatgatagcaacacataaccgacaatatccactgccagttcctttg
actctgccaggggcagagcgtctcttggtcaatgatgtggatcatgctgttccaactaca
cccacagcaaaaactgctccacttgcggtcggatccgatgtggaaccttcaacaagtcat
gattacccctgcgatcagacagaaactgctcaagatggctttaatggaagccagcatgga
gccaagcatttcttgtgtagcaccagtttggcttcaagaagaaaacgaattcatcaacac
tttgatgaccttgagagatgctacttttccatcagacagggagactttccaagtgatact
ggtacatcagatgcgttggattatttcacggatagtcttgcaaaatttacaaagttcagt
ggattccgctgcttagctacacttagttatgccagtgatatttacaatggatcgagtatc
gtttcaagtattgagtttgaccgcgattttgactactttgcaattgctggggttaccaag
aaaattaaggtatttgaatatggcaccgtgatcagagatgtagtcgatattcactgtcct
gtcaatgaaatggtctgcaattcaaaaattagttccatctgttggagttcgtaccacaaa
ggcttactggccagtagtgactacgaaggtaccgttacactctgggacgcgtttacagga
tcaaaaaccaggtcttttcaggaacacgagaaaaggtgttggagcgtggattttaatcac
gtggatcccaaactactcgcctccggatctgatgacgcgaaagtcaagctgtggtcgaca
gacatggaacattccgtcgcctgtttggaagccaaagcaaatgtttgttgcgtcaaattt
aatccagagagtagatatcacttatcgtttggatcagcagatcattgtgtccattattat
gatttacggaacactacgcttccaataacagtttttaaaggtcacaggaaggcagtgtcc
tacaccaaatttatcaacactgaagaaattgtatctgcatcaaccgatagtcagttgaaa
ttgtggaatataagtaagccgcactgtcttcgaactttcaaaggccacatcaacgaaaag
aactttgtaggactagcttccaatggagattatgttgcctgtggaagtgaaaacaactcg
ctatatttatactacaagggcctttccaaacagttactcacatttaaatttgacactgtg
cgaagcgttttggaaaaagacaagaaagaagatgacgctaatgaatttgtaagcgccgtt
tgttggagaactggttctaacgttgtagtggctgcaaatagtcaggggaccataaaggtt
ctggagctggtttga

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