Acropora millepora: 122964636
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Entry
122964636 CDS
T06134
Name
(RefSeq) DNA mismatch repair protein Msh6-like isoform X1
KO
K08737
DNA mismatch repair protein MSH6
Organism
amil
Acropora millepora
Pathway
amil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122964636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amil03400
]
122964636
DNA repair and recombination proteins [BR:
amil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
122964636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
122964636
NCBI-ProteinID:
XP_044184294
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All DBs
Position
12:20132767..20156468
Genome browser
AA seq
1369 aa
AA seq
DB search
MATLFSYFNKTPKGKKPPSPVCSEIADKKKSNSPKEGAKGFSPINEDKARVNGKAKRKNE
ESCSGEIQLYDVVWAKLEGHPWWPSLVCKHPTQDAFQQKGKYHVQFFGEPPSRAWVKINN
VKAFIKKLNNNVVDPTIKKAAQQAEDTLSLAREQRNKLVKCLASDEEESPEEEGQSMQLD
GESSDKALNSQKRKNAGHDDDDDSDEEVIGRKQNGKRPRRKATLRNSKTKKRRVIQSGSE
GDSEDDYKPDDNNDDDDESCSSGVDEKELEDEVLHSEDEIEDNTEKQSRKRKRGKVFTPH
QQKTKSCKPSTPCTPVSSGASSVNTPSPSGVLQGTLAKKVSSSASKAAESLARFQMTASP
TTSSNVDKEGGEGSYTHERLDWLKEDKRRDKHGRPMSHPEYDPRTLLVPSSFLTSKEVTP
AMKQWWQLKVENFDTILFFKVGKFYELYNMDATVGVKELGLIYMKGNFAHAGFPEIAFGR
YSDTLIQKGYKVARVEQTETPEMMKERCRKTLSVSRSDQVVKREICAIITKGTKTYSFLD
GDCTDSEAAYLLAISEKGSDDSSGGESVYGVCFVDTSIGRFHIGQFQDDRQASRLRTLVA
HYTPVQVLCCRGGVTLKTQHVLSHELMSSMKEYLIPGSQFWEASKTLKVLAEEEYFKEDK
TSTENSVKSWPEILRKLTDGDPLGLTPADGSELALSALGAVVWYLKKSLIDHEVLSMGNF
EEYTPLDSSPNAGRSAAFMKGRQHMILDNVTLTNLDVIPYGPDSSLEGTLLERLDNCSTP
FGKRLFKQWLCAPLCNPTAINDRLNAVEDLMANRGLMAECKELLRTLPDLERLLKKIHAL
SLPKDPNHPAHRAILYNEDTYSKRKINDFLTVLEGFGKAMEIVALFSNHSTSFRSKLLLQ
VISEERQFPCLKELLLTFKHAFDHNKARNEGVILPKPGVDPDYDGALADINATKGWFDKY
LKKQCAALGCKVTYWGSAKNRFQLEVPDSIRKIPDEYTLQSQKKGFKRYWTAEIEDKLAE
LVNAEERREEALKDTMRHVFHKFDQEYKTWDKAVQCIAVLDSLISLASYSSKCDGPMCRP
EIVLPEQTEAGNFQPFFEIRDGRHPCISRTFSGGDFIPNDTVVGIKNDEDCEETAVNSHS
TCVLVTGPNMGGKSTLMRQAGLILIMAQMGCFVPAEKCRLTPVDRVFTRLGAQDRILSGE
STFFVELNETSTILKHATQHSLVIVDELGRGTATYDGTAIACAVVRALSRQIRCRTLFST
HYHSLVEEFSADENVRLGHMACMVENEDDTDPIKETITFLYKFVKGACPKSYGFNAARLA
GIPDEVIALAVKKARQFEESTERIKIFRQLLAKDKYSAQDILSLRERFH
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcttttctcttacttcaacaaaacaccaaaaggcaagaaaccaccttctcca
gtctgcagtgaaattgcagacaaaaagaaaagcaattccccgaaagaaggagcaaaaggc
ttttcgcccataaacgaggacaaagcaagagttaacgggaaggcaaagagaaagaacgaa
gaatcatgttctggagaaattcaactttatgacgttgtgtgggctaaactcgagggtcat
ccttggtggccaagtttggtttgcaagcatcctacgcaagatgcatttcagcaaaagggg
aagtatcatgtacagtttttcggcgaaccgccaagtagggcttgggtgaagatcaataat
gtaaaagcattcattaaaaagctgaataacaatgtggtcgacccaacaataaaaaaggca
gcccaacaagcagaggataccctgtctcttgcaagagaacaaagaaacaaacttgtgaag
tgcttagcctcggatgaggaagaatctccagaggaagagggacagtcaatgcagttggat
ggcgagagttcggacaaagccctgaatagtcagaaaagaaagaatgcaggtcatgatgat
gatgatgatagcgatgaggaggtcattggaaggaagcaaaatggcaaacgtcccaggagg
aaagctactctaagaaattctaaaacaaagaaaagacgggtaattcaatctgggtctgaa
ggagattctgaagatgattataaacctgacgacaataatgatgacgatgatgagagctgt
agcagtggtgtcgatgaaaaggagttagaagatgaggtgcttcattctgaagatgagatt
gaagataacactgaaaagcaatcacgtaagcgcaaaagaggaaaagtgtttaccccacat
cagcagaaaacaaaatcttgtaaaccttccacaccttgcacacctgtcagtagtggtgca
tcttcagtaaacacaccttcaccctctggagtactgcaagggacgttagcaaagaaggta
tcaagctcggccagtaaagctgcggaatctttggccagattccaaatgactgcatcgcca
accactagctcaaatgtagacaaggaaggtggtgaaggaagctatactcatgaaaggttg
gactggttaaaagaagacaagagaagagacaaacatggtagaccaatgtctcaccctgaa
tatgatccaagaacactactggttccttcgtctttcttaacctccaaagaagtaacacct
gccatgaaacagtggtggcagttaaaagttgaaaattttgatacaatcctcttctttaag
gttggcaagttctatgaattgtacaacatggatgcaactgttggtgtgaaagaacttggg
ttgatatatatgaagggtaattttgctcatgctgggtttccagaaattgcatttggtcgt
tactctgatactctaattcagaagggttacaaggttgcaagagtggaacaaacggaaacc
ccagagatgatgaaagagagatgcaggaaaactctctctgtgtcaaggtctgaccaagta
gtcaagagggaaatatgcgcaattatcaccaaaggaacaaagacatacagttttcttgat
ggtgactgcacggacagcgaggcagcttaccttctagctatttctgagaagggatctgat
gattcttcaggaggtgaaagtgtttatggagtttgttttgttgatacatctattggaaga
tttcatattggacaatttcaagatgatcgtcaagcttctcgcctcaggactctagttgct
cattatactccagtgcaggtgttatgttgccgaggaggtgtaaccttgaagacccaacat
gtgcttagtcacgaattaatgtcatctatgaaagagtatcttattccagggtcacagttc
tgggaagcaagcaagacattaaaagtcttagcagaggaagaatatttcaaagaagacaag
acaagcacagagaattctgttaagagctggcctgagatattgagaaaattaactgatgga
gatcccttaggattgacaccagctgatggcagtgaattagcgttgagtgctcttggtgca
gttgtgtggtatctgaaaaagtccctcatcgatcatgaagtgttgtcaatggggaatttt
gaggaatacactcccctggacagttctccaaacgctggaagaagtgcagctttcatgaaa
ggaagacagcacatgattcttgataacgtaactttgacaaatctggacgttattccgtat
ggtcctgattcatctttagaaggcacattactggagagattagataactgttctactcca
tttggcaaacgtttgtttaagcaatggctttgtgctcctctgtgtaatcccacagcgatc
aatgacaggttgaatgcagttgaggatctcatggcgaaccggggattaatggcagaatgc
aaggaactgttgcgaaccttaccagacttggaaagattattgaagaaaatccatgcgttg
agtttacccaaagacccaaaccatccagcccaccgagccattttgtacaatgaagacacg
tacagtaaacggaaaataaacgactttctcactgtgttggaaggcttcggtaaagcgatg
gagatcgttgctctgttttcaaaccactccacatcattcagatcaaaacttcttcttcaa
gtgatttcagaagaacgccaatttccctgtcttaaggaacttttgctaacattcaagcat
gcttttgatcacaacaaggcaaggaacgaaggagttattttaccaaagccaggtgttgat
ccagattatgatggcgctttggcggacattaacgctacaaaaggatggtttgacaagtat
ctaaaaaagcagtgtgccgcactgggatgtaaggtaacttactggggatcagccaagaat
cgtttccaactggaagtcccagattccattcggaaaattccggatgagtacactctgcag
tctcagaagaaaggatttaaacgttactggaccgcagagatcgaagataaactggctgag
ctcgtgaatgcggaggaaagacgcgaggaagctctgaaggacaccatgagacacgtgttc
cataagtttgaccaagagtacaagacttgggacaaagctgtccagtgtattgctgtgttg
gactcgcttataagccttgcttcttacagctcgaaatgtgatggtccaatgtgtcgacct
gaaatcgttctccctgaacaaactgaagctggcaatttccagccattctttgaaatccgc
gatggccgccacccttgcatttctcggacctttagtggcggtgatttcattcctaatgac
actgttgttgggataaaaaatgacgaggactgcgaggagacagcggttaacagtcacagc
acatgcgtgttggtcaccggtcctaacatgggcggcaaatcaactctgatgagacaagca
ggacttattttgatcatggcgcaaatggggtgtttcgtgccagctgagaagtgtcgtcta
acccctgtggatcgtgtttttaccagacttggtgctcaagacaggattttatcaggtgaa
agtacgttctttgtggagctcaatgaaacatctaccattctcaaacacgctacccagcat
tcactggtcatcgtggacgagcttggacgagggaccgccacgtatgatgggacagctatc
gcttgcgctgtagttcgagcgctgtcgaggcagataagatgcagaactctcttctctaca
cattaccattcacttgtggaagagttctccgccgatgagaatgttcgtcttggtcatatg
gcctgcatggttgaaaatgaggacgacacagaccccatcaaggaaaccataacgttctta
tacaaatttgtcaaaggcgcatgtccgaagagttacgggttcaatgcagcgagattggct
ggcattccagatgaggtgatagcacttgctgtgaaaaaagccagacaattcgaagaatca
acggaaagaataaaaatcttcaggcaacttcttgcaaaagacaagtacagtgctcaagat
attttaagtctgcgagaaagatttcattag
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