Acropora millepora: 122965091
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Entry
122965091 CDS
T06134
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like
KO
K19613
leucine-rich repeat protein SHOC2
Organism
amil
Acropora millepora
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_13
LRR_LRWD1
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
122965091
NCBI-ProteinID:
XP_044184988
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Position
12:9719909..9722860
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AA seq
720 aa
AA seq
DB search
MEEVNEIVRKAVVNEETNLDFSSLELDVLPAAVFSESLAHVTELNVDYNELQCLPMAISR
LSALRVLSATGNQLREIPEAINKLENLQALHLKENYIRQLPEYLSSLERLEILDATGNGI
DSWTMGLGECLLELRLDENKLTSLPVSFSRMKSLKVLELGNNNITNLPGDIGKLNQLEIL
NVSCNRLSKLPSSLEDLPNLRIFDLSNNSIDSLPERFQSAKVLESFFMEKNYLRTLPAWF
DSLPRIVNIGLADNQLLESPLPESFGISSGGTLRMLDLSANNISKLPDSMGELKHLENLL
LGSTISELERRAFQNGNWLRTLPHTFGWMINLTKLHLDENQLVELPNDFGLLVNLEWADF
GQNRLQSLPKSFCLLSKLWFLQLSQNYLKALPEDFGNLANLIELRLSFNYLTELPSSFER
LTNLQTLDLFHNELTKIPKELLSLKKLLRLDLDKNKFKLRAEKVPKLTKQVKYPSKDPSL
ADNWRGKFRDDYIEPCEEKTVEILKDVNEDEDSNGDDAEDDKDTCASEAALEFAMKRSLS
IWKSHVGPEERSVRPGQGNATTAETHETISPQKKEEIIFELSKDIYSEMFEDADDIMSQK
GSSCQSEEIKQAALDPQNSICSDSLETAEDWDKEMQDSTAYKIVLDTFKQRSHNKVYFQN
KLQNLLYSYPPASQAFSKTANYKSPVYHCSPPPPGDVHDPCTSALQVGQFDDADEDSSRP
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtgaatgaaatagtaaggaaggctgtcgtgaatgaagaaactaatttagat
ttttcttctttggagctcgatgttctgcctgcagctgttttttctgaatctctcgctcat
gttaccgagttgaacgttgactacaacgaattacaatgcttgccaatggctatttctcgt
ttatctgcgctgagagtcctgtctgccacgggcaaccagttgcgtgagatccctgaagct
attaacaaactcgaaaatttgcaagctcttcacctcaaagaaaactacattcggcaacta
cccgagtatttatcaagtcttgaacgcttggaaattctggatgccaccggaaatggaatc
gactcctggaccatgggattgggggaatgtctgttagaattgcggctggatgagaataaa
ctgacgtctttaccagtgtctttcagccgcatgaagagcctaaaggtgcttgagttggga
aataataacattacaaaccttccaggagatattggaaaactgaatcaacttgagattttg
aatgtgagctgtaacaggctttcaaaattaccttcttcattggaggacctccccaatttg
aggatatttgacttaagtaataatagtattgatagtttaccagaaaggttccaatctgcc
aaagttcttgaaagttttttcatggaaaagaattatcttaggacactgcctgcttggttt
gacagtttgcccagaattgtaaacattggtttagcagacaatcagttgttagaaagtcct
ttgcctgagtcctttggaatctcatcgggaggtacgttacgcatgttagatctgtctgca
aacaacatctcaaagttacccgattccatgggagaattgaaacatcttgaaaacttactg
ctgggaagcacaatttctgaacttgagagaagagcatttcagaatgggaattggctccgt
acgttgccccacacctttggttggatgattaacctcactaagttgcatttagatgaaaac
caacttgttgaactgccaaacgattttggcttgttggtaaatttggaatgggctgatttt
gggcaaaatcgcttgcaaagtcttccaaagtctttttgtttgctcagcaagctctggttt
cttcagctttcacaaaactacttaaaggctctcccagaagattttggaaacctggcaaat
cttatcgaactgaggttgagtttcaactacctgactgaattaccaagctcatttgaaaga
ctcacaaacctccaaactctggacttgttccataatgagcttacgaaaatcccaaaggaa
ctattaagcctaaagaaacttttgcgattggacttggataaaaacaagtttaaactgaga
gctgaaaaagttcctaagttgacaaaacaagttaaatatccatcaaaagatccaagcctt
gcagacaattggcgaggaaagttcagagatgattatattgagccatgtgaggagaaaaca
gtcgagatattgaaagatgtaaatgaagatgaggacagcaatggtgatgatgcagaggat
gacaaagatacctgtgcaagtgaagcagccttagagtttgctatgaagagaagtttgtca
atatggaaatcacatgttggtccagaggaaagatctgtaagacctgggcagggtaatgca
acaacagctgaaacacatgaaactatttctcctcagaaaaaagaggaaatcatttttgaa
ctttccaaagacatatacagtgaaatgtttgaagatgcagatgatattatgtctcagaaa
ggatcttcctgtcagagtgaggagataaaacaagcagcccttgaccctcaaaatagcata
tgttctgattccttggagacagcagaggattgggataaagagatgcaagattctacagca
tacaaaattgttcttgacacattcaagcaaagaagtcataacaaagtgtattttcaaaac
aagctgcaaaatttactgtactcttacccccccgcaagtcaggcattttctaagactgcc
aactataaatctccagtttatcattgttcaccaccaccccctggtgatgttcacgatcca
tgtacctcagctcttcaggttgggcagtttgatgatgctgatgaggactcaagccgacca
taa
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