KEGG   Advenella mimigardefordensis: MIM_c04640
Entry
MIM_c04640        CDS       T03016                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
  KO
K03089  RNA polymerase sigma-32 factor
Organism
amim  Advenella mimigardefordensis
Brite
KEGG Orthology (KO) [BR:amim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amim03021]
    MIM_c04640 (rpoH)
Transcription machinery [BR:amim03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MIM_c04640 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_3 CM_2
Other DBs
NCBI-ProteinID: AHG62566
UniProt: W0P738
LinkDB
Position
complement(529831..530709)
AA seq 292 aa
MSNQALTLQNSVASAISNPGALGTIESYISAVNRIPMLTPEREQQLGETLQEKGDLNAAR
ELIMSHLRLVVSISRQYLGYGLPHADLIQEGNIGLMKAVKRFDVTRGVRLVSFAVHWIKA
EIHEYIIRNWRLVKVATTKAQRKLFFNLRSMRPDGQTLTPEHIEGIASKLNVRPEDVSEM
EVRLTGRDMSLESQDDDSDDFAPISYLSDEGEQEPGTVLDRRAHDDMQGTGVSNALAVLD
PRSRRIIEARWLQDEGGGSTLHELADEFGVSAERIRQIESAALKKMRGAFAA
NT seq 879 nt   +upstreamnt  +downstreamnt
atgtcaaatcaagcgcttacactgcaaaattcggttgcctcggcgatttccaatccgggc
gccctgggtacgatcgaatcttacattagtgctgtgaatcgcatccccatgctcacgcct
gaacgcgagcagcaattgggcgagacccttcaggaaaaaggtgatctgaacgctgcgcgt
gaactgatcatgtctcacctgcgactggttgtttccatttcccgccaatatctgggctat
ggattgccccatgccgaccttatccaggaaggcaatatcgggctgatgaaagcggtcaaa
cgtttcgacgtcacccgcggcgtacgcctggtgtcctttgccgtgcactggatcaaggcc
gaaattcatgaatacatcatccgcaactggcgcttggtgaaagtcgcgaccaccaaggcg
caacgcaagctgtttttcaatttgcgcagcatgcgccccgatggccagacgctcacgccc
gagcacattgaaggcattgcctccaagctcaatgtgcgccccgaagacgtcagcgaaatg
gaagtacgcctgaccggccgtgacatgtccctggaatcacaggacgatgacagcgatgat
ttcgcgcctatttcctatctgtccgacgaaggcgagcaggaacccggtacggtgctggat
cgccgcgctcacgacgatatgcagggcacaggcgtctccaatgcgctggccgttctggat
ccccgctcgcgtcgcattatcgaggcccgctggttacaggacgaaggcggtggttctacg
ctgcacgaactggccgatgagttcggcgtatcggcagaacgcatccgtcagattgaatcg
gccgcactcaagaaaatgcgtggcgcgttcgcagcctga

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