Advenella mimigardefordensis: MIM_c05320
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Entry
MIM_c05320 CDS
T03016
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
Organism
amim
Advenella mimigardefordensis
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AHG62633
UniProt:
W0PC52
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Position
complement(597129..598769)
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AA seq
546 aa
AA seq
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MSFDSLGLSPVLLAALNKAGFTQPTPVQTEAIPKALEGKDLIVSAQTGSGKTAAFMLPSL
HRIAGMPGNKGVGVQVLVLTPTRELALQVAEATKSYGAGINDLRIATVVGGMPYGAQIKA
LSRRVDVLVATPGRLIDHLNARRVNLSRVHTLVLDEADRMLDMGFIEDIENIVAQTPSDR
QTLMFSATFEGTVARMAADMLENPERIDIANQKQKHANITQTLLYADDSGHKLRLLGHLL
RDASMDQAIVFTSTKRGADALAERLEDEGFAASALHGDMNQRQRTRTLGMLQKGRLRVLV
ATDVAARGIDVQGISHAINFDLPMQAEDYVHRIGRTGRAGRNGQAFTLATHGERHKIRRI
EQFTGQPMPAEVIPGLEPVKTAESGRGAGGKGRGGKPGGSRHGRPGGYSREKDHARSGFS
HRKGGNAPSYGAREDSRFAEGRSDRPARAARTYDAPRESLIDRAATSLSRNPFASDRPRT
ERSGFVRADAAPAARKPRSEFAPAPSRKPRPSTRSDGGFGGDRHGRSDKPGFSRGKKKPG
SSRTWA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattccctgggtctctcacccgttctgcttgctgccctgaacaaggccggc
tttactcagcctacacccgtacaaaccgaagcgatccctaaagcccttgaaggcaaggat
ctgatcgtttccgcgcaaaccggtagtggcaaaaccgcagcattcatgctgccttcactg
caccgtattgccggcatgcctggcaacaaaggcgttggcgtacaggtactggtgctgaca
cccacccgtgaactggccctgcaagtggctgaagccaccaaatcatacggcgccggtatc
aacgatctgcgtatcgccacggtcgtgggcggcatgccttacggcgcacaaatcaaggcc
ctgtcccgtcgtgttgacgtgctggttgccacccctggccgcctgattgaccatctgaac
gcacgccgcgtgaatctgtcacgcgttcacacgctggtgctggacgaagccgaccgcatg
ctggacatgggcttcatcgaagacatcgaaaacatcgttgcacaaacaccgagtgatcgc
cagacactgatgttctcggctacattcgaaggcacagtggctcgcatggctgccgacatg
ctggaaaatcctgagcgcatcgatattgcgaaccagaaacagaaacacgccaatattacc
cagacgctgctttacgcagatgacagcggccacaaactgcgcctgctgggtcacctgctg
cgtgatgcctccatggatcaggccatcgtctttacgtctaccaaacgcggcgctgacgca
ctggccgaacgtctggaagatgaaggctttgccgcgtctgccctgcatggcgatatgaac
cagcgtcagcgcacccgcaccctgggtatgctgcaaaaaggccgtctgcgcgtattggtt
gcaactgacgttgctgcccgcggtattgacgtacaaggtatcagccacgccatcaacttc
gacctgcccatgcaggctgaagactacgttcaccgtatcggccgtactggccgcgccggt
cgcaacggtcaggcatttaccctggcaacccatggcgaacgtcataaaatccgccgcatt
gaacagttcaccggccagcctatgcccgccgaagtgatccccggcctggagcccgtcaaa
acagccgaaagcggtcgcggcgccggtggtaaaggtcgcggcggcaaaccaggtggttct
cgccacggtcgtcccggcggatactcacgtgaaaaagaccatgcccgcagtggcttcagc
catcgcaaaggcggcaacgcgccttcctatggcgcccgtgaagactcgcgctttgccgaa
ggccgttccgatcgccctgctcgtgcagcccgcacttatgacgcaccgcgcgaatcgctg
attgaccgtgccgcaacatcactgtcacgcaacccgttcgcatcggatcgtccacgcacc
gaaagaagcggttttgttagagccgatgcagcacctgctgcgcgtaagccacgcagcgag
tttgctcctgcgccttcacgcaagccacgcccaagcacccgttccgacggcggcttcggt
ggcgatcgccatggccgttcagacaaacccggtttttcacgcggtaaaaagaaacccggt
tcctcacgcacctgggcgtaa
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