Advenella mimigardefordensis: MIM_c05510
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Entry
MIM_c05510 CDS
T03016
Name
(GenBank) putative nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
amim
Advenella mimigardefordensis
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amim03019
]
MIM_c05510
Messenger RNA biogenesis [BR:
amim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MIM_c05510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
AAA_33
AAA_16
AAA_28
AAA_22
nSTAND3
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AHG62652
UniProt:
W0PAX6
LinkDB
All DBs
Position
complement(616028..616894)
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AA seq
288 aa
AA seq
DB search
MLHVVLITGISGSGKSVALRQLEDLGYSCIDNLPVSLLHDLVANARENSLKTVAVAIDVR
TPGELAGLPGVITALRSMGLPMQVIFLDSDDETLIHRYSESRRKHPLSNRMRETTGITPS
LEDCITHERNLLAPLREQEHVIDTSGLTPGQLRAWVKDVVDHEEPEVLLTFESFAYKKGV
PNDADLVFDVRCLPNPHYDSNLRPLTGRDEPVAAWLAQFGSVPALINDIAAYIEKWLPLY
MQDTRSYLTVAIGCTGGQHRSVYVAEELAKRFSSYKPLRVRHRAQLTL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatgttgttctaattaccggcatttcaggatcaggaaaatcggttgcgctgcgt
cagctcgaagacctcggctattcctgtatcgataacctgcccgtcagcctgctgcacgac
ctggttgccaacgccagggaaaacagccttaaaacggtagctgttgcaatcgatgtcaga
acaccaggcgaactggccggtctgccaggcgtcattaccgcacttcggagtatgggtctg
cccatgcaagtcatctttctggactccgatgacgagaccctgattcaccgctattccgag
tcccggcgcaagcacccgctaagcaaccgcatgcgcgaaaccacaggaattacgccgtct
ctggaggattgcatcacacacgaacgcaatcttctggcgccgctacgcgagcaggaacat
gtgattgatacttcgggtttgacgcccggtcaattgcgcgcctgggtcaaagatgtggtc
gatcatgaagagccggaggtccttttaaccttcgaatccttcgcctacaaaaaaggcgtt
cctaatgacgctgacctcgtttttgatgtaagatgcttgcctaatcctcattacgacagt
aacttacgcccgcttacgggccgtgatgaacccgtggcggcatggctggctcagttcggc
agcgtgcccgccttaatcaacgatattgccgcatatattgagaaatggctcccattgtat
atgcaggatacgcgtagttacctcaccgttgccattggttgcaccggtggccagcaccga
tcggtctatgtggccgaagaactggcaaaacgcttcagttcctacaaacctttacgcgtt
aggcatcgtgcccagttaacactatga
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