Advenella mimigardefordensis: MIM_c07200
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Entry
MIM_c07200 CDS
T03016
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
amim
Advenella mimigardefordensis
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amim03009
]
MIM_c07200 (rimO)
Enzymes [BR:
amim01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
MIM_c07200 (rimO)
Ribosome biogenesis [BR:
amim03009
]
Prokaryotic type
ribosomal protein modification factors
MIM_c07200 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
YajR_YAM
Homeobox_KN
Motif
Other DBs
NCBI-ProteinID:
AHG62821
UniProt:
W0P7Y0
LinkDB
All DBs
Position
complement(810758..812086)
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AA seq
442 aa
AA seq
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MSAPRVGFVSLGCPKALVDSERILTQLRTEGYDISPSYEGADVVVVNTCGFIDSAKAESL
DAIGEAISANGKVIVTGCMGVEEQVIRQVHPSVLSVTGPQQYEEVVRAVHGVAPPLREHD
PYVDLVPPQGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVGDVLQEAQRLAN
AGVKELLVISQDTSAYGVDIKYRSGFWNGRPVRTRMTELCQALSELGIWVRLHYVYPYPS
VDEVIPLMAEGKILPYLDIPFQHASPRVLKAMKRPAFEDRTLARIHQWRETCPDLTIRST
FIVGFPGETEEDFQYLLNWMTEAQLDRVGCFQYSPVEGAPANALGDHVPDDVKQDRWERF
MAHQQAISTARLALKVGRDIDVLVDEIDEDGDAVGRSHADAPEIDGCVFISSTEKLKPGQ
IVRCTVTDSNEYDLWADHKPLS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctccccgcgttggctttgtcagtctgggctgcccgaaggcactcgttgactct
gaacgcatcctgacccagttgcgcactgaaggttatgatatttctccctcctatgaaggc
gccgacgtggtagtggtcaacacctgtggcttcatcgacagtgccaaggccgaatcactg
gatgccatcggcgaggccatttccgccaacggcaaggtgatcgtgaccggctgtatgggc
gtagaggaacaggtcattcgccaggtacaccccagtgtgctgtccgtcaccggcccccag
caatatgaagaagtggtccgcgccgtccatggcgtcgccccgcccttgcgcgaacatgat
ccttacgtagacctggtgccgccgcagggcatcaagctcacaccaagacattacgcttat
ctgaaaatttccgaaggctgtaatcatcgctgcagcttctgtattatcccgtccatgcgc
ggcgatctggtcagccgtccggtgggcgatgtattgcaagaggcgcaacgcctggccaat
gcaggcgtgaaggaattgctggtcatttctcaggataccagcgcctatggcgtagacatc
aaatatcgcagcggcttctggaacggacgccccgtgcgcacacgcatgaccgaactgtgc
caggctctgtccgagctgggtatctgggtgcgtctgcattatgtttatccgtaccccagc
gtggatgaagtgatcccgctgatggctgaaggcaaaattctgccatacctggacatcccg
tttcagcatgccagccccagggtcctgaaggcaatgaagcgccctgccttcgaagaccgc
acactggcgcgtattcaccagtggcgcgaaacctgtcccgacctgaccatccgttctacc
ttcattgtcggtttccccggagaaaccgaggaagacttccagtatctgctgaactggatg
accgaggcacagctggatcgcgtaggctgtttccagtattcgccggtagagggcgcacct
gctaacgccctgggagaccatgtaccggacgatgttaaacaggatcgctgggagcgcttt
atggctcaccagcaggccatctccaccgcaaggctggcgctcaaggtcggacgcgatatc
gacgttctggtcgatgaaatcgatgaggatggcgatgccgttggccgctcgcatgccgat
gcccccgaaattgacggctgcgtgttcatcagcagtaccgaaaaactcaagccaggccag
attgtgcgctgtaccgtgaccgacagcaacgaatacgatttgtgggccgatcacaaaccg
ctatcatga
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