Advenella mimigardefordensis: MIM_c09740
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Entry
MIM_c09740 CDS
T03016
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
amim
Advenella mimigardefordensis
Pathway
amim00470
D-Amino acid metabolism
amim00550
Peptidoglycan biosynthesis
amim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MIM_c09740 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MIM_c09740 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amim01011
]
MIM_c09740 (murD)
Enzymes [BR:
amim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
MIM_c09740 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
amim01011
]
Precursor biosynthesis
Amino acid ligase
MIM_c09740 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Motif
Other DBs
NCBI-ProteinID:
AHG63073
UniProt:
W0PDF6
LinkDB
All DBs
Position
1106639..1108171
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AA seq
510 aa
AA seq
DB search
MSTDTGGVADFPSRVLILGLGETGLASALWCLRQNAALHIVDTRDNPPGLAALAEHGQGD
ITHFLGDQAFSDAALDGVKQIILSPGLAPSEPALAAFLDKAQQRQIPVSGEIELFARALT
DLAATQGYRPQVLAITGTNGKTTVTSLTQAMLETAGKTAIAAGNISPSALTALMQALDTQ
TLPQVWVLELSSFQMQTTTSLQPDAATVLNLTQDHLDWHRDMQEYAEAKARLLAASPVAI
VNRNDAAVVAMVEDINDVQVRSFGVDAPVLVGDTGMESAHGVTWITASEKDDFELPEAPG
ARRRKNVDKPRRKPGLIKRLMPADAMQIRGQHNMLNAQAAMLLCRELGVGWGPMLITLRE
FAAGMYRTQFERSIRGVDFFNDSKGTNVGATVAALDGMGRDIVLIAGGVGKGQDFSPLAA
PVRRCARAVVLIGEAAAVIEQALAQTGVTCHRAESMEAAVRQALELAQQGDAVLMSPACS
SFDMFKSYAHRGQVFSEAVHELALDNGEVA
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgatacaggcggcgtagccgatttcccatctcgtgtcctgattcttggcctg
ggtgaaaccgggctggcctcggcattgtggtgcctgcgccagaatgcggcactgcatatt
gtcgatacgcgggacaacccgcccggcctggcggcgcttgccgaacacggtcagggtgat
atcacacatttcctgggtgatcaggcattctcggatgccgcgcttgatggtgtgaagcag
attattctcagtcccggccttgcgccctctgagcctgcgctggccgcctttctggacaag
gcgcagcaacgacagattccggtgagcggcgagatcgaactgtttgcgcgagcgctgacc
gatcttgccgcgacacaaggctatcggccgcaggtgctggccattaccggcaccaacggc
aaaaccaccgttacttcgctgacgcaagccatgctggagaccgcgggcaaaaccgccatt
gcagccggcaatatcagcccatcggcgctgactgccctgatgcaggcgctggacacgcag
acattgccgcaggtgtgggtgctggaattgtccagtttccagatgcagacgacaacgtca
ctgcagccggatgcggctaccgtattgaatctgacccaggaccaccttgactggcatcgc
gatatgcaggagtacgctgaggccaaggcgcgtctgctggctgccagtccagtggctatt
gttaatcgtaatgacgctgccgtcgtggccatggttgaggatatcaatgatgttcaggtg
cgcagctttggtgttgatgcaccggtactggtgggcgataccggcatggaaagcgcacac
ggcgtgacctggattaccgccagcgaaaaggatgatttcgaattgccggaagcgcccggc
gcgcggcgcaggaaaaatgtcgacaagcccagacgcaagcccggtctgatcaagcgcctg
atgccggctgatgctatgcaaattcgcggacagcacaatatgctcaatgcccaggccgcg
atgctcctgtgtcgcgagctgggcgtaggctggggacccatgctgattacgctgcgtgaa
tttgctgccggcatgtatcggactcagtttgaacgcagtattcgcggcgttgactttttc
aatgacagcaagggtaccaacgtaggcgctaccgtggcagcacttgacggcatggggcgc
gacattgtgctgattgccggcggtgtgggcaaaggccaggatttttctccgctggccgcg
cccgtgcggcgctgtgcccgcgctgtggtgctgatcggagaagcggccgcagtcattgaa
caggcgctggcgcaaaccggggtcacttgtcaccgtgccgagtcgatggaagcggcggtc
aggcaggctctggaactggcgcagcagggcgacgcagtgttgatgtcgcccgcatgttcc
agcttcgatatgtttaaaagctatgcgcatcgcggtcaggtgttttctgaggccgtgcat
gagctggcgctggataacggagaagtggcatga
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