Advenella mimigardefordensis: MIM_c13250
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Entry
MIM_c13250 CDS
T03016
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
amim
Advenella mimigardefordensis
Pathway
amim00020
Citrate cycle (TCA cycle)
amim00190
Oxidative phosphorylation
amim00650
Butanoate metabolism
amim00720
Other carbon fixation pathways
amim01100
Metabolic pathways
amim01110
Biosynthesis of secondary metabolites
amim01120
Microbial metabolism in diverse environments
amim01200
Carbon metabolism
Module
amim_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amim_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amim_M00149
Succinate dehydrogenase, prokaryotes
amim_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
MIM_c13250 (sdhA)
00650 Butanoate metabolism
MIM_c13250 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
MIM_c13250 (sdhA)
00720 Other carbon fixation pathways
MIM_c13250 (sdhA)
Enzymes [BR:
amim01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
MIM_c13250 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
Thi4
GIDA
FAD_binding_3
Pyr_redox_3
FAD_oxidored
NAD_binding_8
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
AHG63417
UniProt:
W0PD71
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All DBs
Position
1508522..1510300
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AA seq
592 aa
AA seq
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MVAINSSLPRRQFDVVVVGAGGSGMRCSLQLAQAGLSVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWYWHMYDTVKGSDWLGDQDAIEFMCRQAPHAVYELEHFGMPFDRNANGTIY
QRPFGGHTANFGEKPVQRACAAADRTGHALLHTLYQRNVAARTQFFVEWMALDLLRNDAG
DVVGVTALEMETGEVYILEAKAVVLATGGAGRIWQASTNAFINTGDGLGMAARAGICLQD
MEFWQFHPTGVAGAGVLITEGVRGEGGILLNKDGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPDGSYVVLKLDHLGADVINKRLPSIREIAIKFGNVDPIKEPIPVVPTIHYQ
MGGIPANYHGEVVTWENGEEKIVNGLYAIGECAAVSVHGANRLGTNSLLDLVVFGRAAGN
RIVESHLERQLAHQDLPKESLDFSLARINELESRKSGEKVQDVANSIRVSMQRHCGVFRT
LELLKEGVGQIDELAEQAKHVKFDDKSKVFNTARVEALELANMTEVARATIKSAANRNES
RGAHALNDHPERDDVNWLKHTLWHSADGRLEYKPVHMKPLSVESFPPKARTF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgctatcaattcatcattaccgcgccgccagtttgatgtagtggttgtaggtgcc
ggcgggtccggtatgcgctgctcccttcaattggctcaggccggattatccgtcgccgtc
ctttccaaggtttttccaacccgttctcataccgttgccgcgcagggtggtatcggtgct
tcgctgggtaacatgagtgaggataactggtactggcacatgtacgataccgtcaaggga
tcagactggctgggcgaccaggacgccatcgaattcatgtgccgtcaggcgcctcatgct
gtttacgagctcgaacacttcggcatgccgttcgatcgcaatgccaacggcaccatttat
cagcgtcctttcggcggacacactgccaatttcggtgagaagcccgtacagcgtgcctgt
gctgcagctgaccgtaccggtcacgcgctgctgcataccctgtatcagcgcaacgtcgct
gcgcgtacccagttcttcgtcgaatggatggcgctggatctgctgcgtaacgatgccggc
gatgtcgtgggtgtgaccgcgctcgaaatggaaaccggtgaagtctacattctggaagcc
aaggctgtggtgctggctaccggtggcgccggccgtatctggcaagcctctaccaacgcc
ttcatcaataccggcgatggcctgggcatggctgcccgtgcaggtatctgtttgcaggac
atggaattctggcagtttcacccaaccggcgtggccggtgccggcgtgctcattaccgaa
ggggtgcgcggcgaaggcggcatcctgttgaacaaggatggtgagcgtttcatggaacgt
tacgcgccaaccctgaaagatctggcaccacgcgatttcgtctcgcgctccatggaccag
gaaatcaaggaaggccgtggctgcggtcccgacggcagctatgtggtgctcaaactggat
cacctgggtgcggatgtcattaacaaacgtctgccttcgattcgcgaaattgctatcaaa
ttcggtaacgtggatccgatcaaggaaccgattcctgtggtcccaaccattcactatcag
atgggcggcattccggccaactatcatggtgaagtggttacctgggaaaatggcgaagaa
aaaatcgtcaacggtctgtatgccattggtgaatgtgctgcggtatcggttcacggtgca
aaccgtctgggcacaaactcactgctggatctggtggtgtttggccgcgctgcaggcaac
cggattgtggaatcgcatctggaacgtcagctcgcccatcaggatctgcctaaggaatca
ttggacttctcgctggcgcgtatcaatgaactggaatcgcgcaaatcaggcgagaaagtt
caggatgtcgcaaacagcatccgtgtttccatgcagcgtcactgcggtgtgttccgtacg
ctcgaactgctgaaggaaggcgtcggccagatcgacgagctggctgagcaggccaagcat
gtcaagtttgatgacaaatccaaagtattcaatacggcgcgtgtcgaagcgctggaactg
gccaatatgacggaagtggcccgggcgacgatcaagtctgcggcaaaccgcaatgaaagc
cgtggcgcccatgcgttgaacgatcatcctgagcgtgacgatgtgaactggctcaagcac
accttgtggcattctgccgacggtcgtctggagtacaaaccagtacatatgaaaccgcta
agtgtggagtcgttccctccaaaagcacgtacattctaa
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