Advenella mimigardefordensis: MIM_c15690
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Entry
MIM_c15690 CDS
T03016
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
amim
Advenella mimigardefordensis
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amim03400
]
MIM_c15690 (sbcD)
DNA repair and recombination proteins [BR:
amim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MIM_c15690 (sbcD)
Archaeal homologous recombinant proteins
MIM_c15690 (sbcD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
FBPase_2
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
AHG63653
UniProt:
W0PF02
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All DBs
Position
1792204..1793340
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AA seq
378 aa
AA seq
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MKFIHTSDWHLGRSLCNHPLLDDQAHILQQIADYAKQHQADALVIAGDVYDRAVPPAAAV
RLLNDFLNRMHSLAIPVVIIPGNHDSADRLGFAATPLNASGVHIIADYEQMLQPVVVSTQ
AGPLYFHGIPYTDPVQVRVYAGEPIDSYEQAHRYLLERIARNTEAPGVHVLISHCFLAGS
QESESERPLAVGGADQVPAALFDGFAYVALGHLHGPQAVRQGRIRYSGSPLKYSFSEEKH
NKGVLLVDFDQNGVAAATALPLHPLHDVRSIEGRLDELLLAAQTDAHSEDYLLVRLTDDH
AILDPMGKLRAVYPNVLQMEKPQLYRDEAQPLMSAARLRRDEFSLFSDFFEQVSGQPMTP
AQRTAMQDVVSQVLKREA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcatccatacctccgactggcacctgggtcgttcactgtgcaatcatcccttg
ctggatgaccaggcgcatattctgcagcaaattgcagactatgcgaagcagcatcaggcc
gacgcattggtgatcgccggcgatgtctatgatcgcgcggtgccgcctgctgctgcggtg
cggctgctgaatgattttctgaaccgcatgcatagcctggctattccggttgtgatcatt
cccgggaatcacgacagcgctgaccggctgggttttgccgcaacgccgctgaacgcatcc
ggtgtgcatatcattgccgattatgagcaaatgctgcagccggtggtggtcagtacacaa
gcggggccactttattttcacggcattccctatacggatccggtacaggtgcgcgtatat
gcgggggagcccatcgacagctatgaacaggcgcatcggtatctgcttgaacgcatcgcc
cgaaatacagaagcgccgggcgttcacgtgttgatcagccactgctttctggccggaagc
caggagagcgagtccgaacgtccgctggccgtaggtggcgcagatcaggtgcctgctgcc
ttattcgacggctttgcctacgtggcgctgggacaccttcacggtcctcaggcggtccgc
cagggacgcatccgttatagcggctcaccgctcaagtacagcttttcggaagaaaagcac
aataaaggcgtgctgctggttgatttcgaccagaacggcgttgccgcagcgacggcgctg
cccctgcatcccctgcatgatgtgcgcagcatcgaaggcaggctggatgaactgcttctt
gccgcgcagaccgatgcacacagcgaagactatttgcttgtcaggctgaccgatgatcac
gcgattctggatccgatgggaaaactgcgggcagtctatccgaatgtgctgcaaatggaa
aaaccccagctttaccgggacgaggctcagccactcatgtctgctgccagattgcgtcgt
gatgaattttcattgtttagtgatttttttgaacaggtcagcggtcagcccatgacgccg
gcacaacgcactgccatgcaggatgtcgttagtcaagtgttgaaaagggaagcgtaa
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