Advenella mimigardefordensis: MIM_c15700
Help
Entry
MIM_c15700 CDS
T03016
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
amim
Advenella mimigardefordensis
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amim03400
]
MIM_c15700 (sbcC)
DNA repair and recombination proteins [BR:
amim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MIM_c15700 (sbcC)
Archaeal homologous recombinant proteins
MIM_c15700 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
cobW
Motif
Other DBs
NCBI-ProteinID:
AHG63654
UniProt:
W0P9X2
LinkDB
All DBs
Position
1793341..1796421
Genome browser
AA seq
1026 aa
AA seq
DB search
MVPLYLHLQAFGPFAVEQKLDFTQLGSNPLFLINGPTGAGKSTLLDAICFALYGETTGDE
KDPRSLRSDLADPATVARVVFGFRLGGKVYEIQRQPAQPVPKTRGSGLREIGTEGAMLDL
TDGTPKVLVAKKAGQITDYVEQLTGLKAEQFRKVMVLPQGKFRELLLETSLKREALFAQL
FQTDIFRQIELQLQERAKDIRARRDANELQIAGLLEQADIEEEKQLAATLAELAEAETAA
KIRRTDTAQLHMRAQRKVEEARRIRAQFEQRDALTAQLARLEQRQAAVAEQEAALRQARA
AAQLRQWYDAAAQTGQRLTQTQARLDDSQLQLETFSQQLVREKADQATQAMAYEQTTALN
VERSRLQALVPKAHELERQQQRLQTLNAAHTQARVALQARTQEQQARQARMAGIKSDHAA
LHAMVAALPDQSMAVARNKLRLDERLACDALAGRLQALRAEQATAANQQVHMQDALHSAQ
REQDRLELAWHQNQASLLAARLQQGLPCPVCGSESHPAPASSDGQQISDQMLRQARQGVQ
AAAQRLATHDAQIMQLARRCDEQQIELDQRRQALGEDAHADLTQLQTRFAEQEQQLQASQ
RARQQLDEGLRLLATLEQAQHTQEQALAELRTQLQTLSVEQGSQEAILQMLEQELPEHCR
SDAQLRVQVDGLTRQIDDLTNAWRRAENTVRQRQDQILGLQSTIAALREQLEQDRQLHVA
AMDKYEQTLQQSEFADTDSWQAAQKDEAQCTALQTAIADHYEALHQTRGRYAELEQVLHS
LAQPDPEQCLQEQQEAALLAQQAEQAWQHIRDRLLALTTLQARLVKIRASSAVLDEEYAV
YGTLSDVASGRQGSKVSLQRFVLSVLLDDVLIGASQRLRKMSRGRYQLIRREQAGRGASG
LDLDVMDEYTGQQRAVATLSGGESFMAALALALGLSDVVQAYAGGIRLDTLFIDEGFGSL
DAESLEQAIRTLIDLQAGGRTIGIISHVSELREQMSLRVDVIPHVSGSQIRVHAPGIADG
ELLQSN
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggttcccttatatttgcatttgcaggccttcggaccttttgcggttgaacaaaagctt
gatttcacccagttgggttccaacccgctgtttctgatcaatggccccaccggcgccggt
aaaagcaccttgctcgacgccatttgttttgctttgtatggtgagaccacgggagatgag
aaagacccgcgttcgctgcgttcggatctggccgatccggcaacggtagcgcgcgtcgtc
ttcggcttccgacttggcggcaaagtctatgaaatccagcgtcagcctgcacagcccgtt
cccaaaacccgcggcagtggcctgcgggagatcggtaccgaaggcgccatgcttgatctg
actgatggcaccccaaaggtgctggttgccaaaaaggccgggcagattaccgattatgtc
gagcagctcaccggcttgaaagccgagcagtttcgcaaggtcatggtattgccgcaaggc
aagttccgcgaactgctgctggaaacgtcactcaagcgcgaagccctgtttgcgcaattg
tttcagaccgacattttccggcagatcgagctgcaattgcaggagcgggccaaagatatc
cgggcacggcgcgacgccaatgagctgcagatcgccggcttgcttgagcaggccgatatt
gaagaggaaaagcagcttgccgccacgcttgccgaattggccgaggcggaaaccgccgca
aaaatccgccgtaccgatacggctcaattgcatatgcgtgcgcagcgtaaggtggaagag
gcccggcggatccgcgcacagtttgaacagcgtgacgccctgaccgcacaattggcccgg
ctggagcagcgtcaggcggccgttgctgaacaggaagctgcgttacgccaggcccgcgcg
gctgcgcagttgcgacagtggtatgatgcagcggcgcagactggtcagcgcctcacgcaa
acacaggcacggctggatgacagccagttgcagcttgagacgttctcgcagcaattggtg
cgggaaaaggcagatcaggcaacgcaggctatggcatacgagcaaaccaccgcgctcaat
gtggagcgcagccgcttgcaggcgctggttcccaaagcacatgaattggagcgtcagcag
cagcgactgcagacgctgaatgcagcgcacactcaggcgcgcgttgcgcttcaggccagg
acccaagagcagcaggccagacaagcgcgtatggccggtataaagtctgatcacgccgct
ttgcacgcaatggtggcggcattgcccgaccagagcatggcagtggcgcgcaataagctg
cgcctggatgaacgactggcctgtgatgcgctggccgggcgcttgcaggcgttgcgcgct
gaacaggcgacagcggcgaaccagcaggtgcatatgcaggatgccttgcactcggctcag
cgggaacaggatcgcctggaactggcctggcatcagaatcaggccagtctgctggccgcc
cgattgcagcaggggctgccgtgtccggtatgcggcagcgagtcgcatccggcgccggcg
tcgtcggacgggcaacagatcagtgatcagatgctgcgtcaggccaggcaaggggtacag
gccgcagcgcagcgcctggcgacgcatgacgcgcagataatgcaactggcgcgccgctgt
gatgagcagcagatcgaactggatcagcgtcggcaggcgctgggagaggacgcgcatgca
gacctgacgcaattgcaaacccggtttgccgagcaggagcagcaactgcaggcgagccag
cgtgcgcgccagcaattggatgaggggctgcgtctgttggcgaccctggagcaggcgcag
catacgcaggaacaggctctggcggagcttcgaacgcaattgcagacattgagcgtagag
caaggcagccaggaagcgattttgcagatgcttgagcaggaactgccggagcactgccgt
tccgatgcgcagctgcgtgtgcaggtagacggattaacgcgacagatagacgacctcacc
aacgcatggcgccgggccgagaacacggtgcggcagcggcaggatcagattctgggcttg
cagtctacgatcgctgcgctgcgcgagcagttggaacaggacagacagcttcatgtcgca
gcgatggataaatacgaacagaccttgcaacagagtgaatttgcggacacggatagctgg
caggccgctcaaaaggatgaggcgcagtgtacggcattgcaaactgccattgccgaccat
tacgaagcgctgcatcagacccgggggcgatatgccgaactggagcaggtgctccatagt
ctggcccagcctgacccggagcagtgtttgcaagagcagcaggaggccgccctgctggct
cagcaggctgagcaggcctggcagcacatccgcgaccgcctgctggcgcttacgaccctg
caggcgcgtctggtaaaaatccgggccagcagtgcggtgctggatgaggaatatgcggta
tacggcacgctgagtgatgttgcttcgggacgccagggcagcaaagtcagtctgcagcgg
ttcgtactgagcgtgttactggacgatgtgctgatcggagcctcgcagcgtctgcgtaaa
atgagtcgggggcggtatcagttgatccgccgtgaacaggcggggcgtggcgcctcgggc
ctggatctggatgttatggatgaatacaccgggcagcagcgcgcggtggcgaccctgtcc
ggtggtgaatcgttcatggccgccctggcgctggcgctgggcttgtccgacgtggtacag
gcgtatgccggcggtattcgccttgacaccctgttcattgacgagggattcggcagcctg
gatgccgagtcgctggagcaggccatacgcacacttatcgatttgcaggccggcggcagg
accatcggtattatttctcatgtgagtgagctgcgtgaacaaatgtccttgcgcgtggac
gtgatcccgcacgtgtcgggcagtcagattcgcgtgcatgcccccggtattgcagatggg
gaattgttgcagagcaactga
DBGET
integrated database retrieval system
