Advenella mimigardefordensis: MIM_c18190
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Entry
MIM_c18190 CDS
T03016
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
amim
Advenella mimigardefordensis
Pathway
amim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MIM_c18190 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amim03400
]
MIM_c18190 (uvrB)
DNA repair and recombination proteins [BR:
amim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MIM_c18190 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MIM_c18190 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AHG63899
UniProt:
W0PAM6
LinkDB
All DBs
Position
2073316..2075337
Genome browser
AA seq
673 aa
AA seq
DB search
MSEAGFIEFADSPFQLYQPYPPAGDQPAAIEALTQGVDDGLMYQTLLGVTGSGKTYTMAN
VIARLGRPALVLAPNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAYVPTRDLFIEK
DSSINEHIEQMRLSATKSLLERRDTIIVGTVSCIYGIGNPGDYHAMVLVLRTGDHTPRQE
ILARLVSMQYERNDVDFSRGTFRVRGEVIDIFPAESAELAVRLSLFDDELESIDLFDPLT
GKIRQRVPRFTVYPSSHYVTPRDTVLRAIETIKEELRDRTKFFVDNNQLVEAQRIEQRTR
FDIEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPQDALMFFDESHWMMGQLRAMY
RGDRSRKETLVQFGFRLPSAMDNRPLKMEEFEQRVRQSIFVSATPSDYENEHSDNVVRQV
VRPTGLVDPMVEVRPALTQVDDLLGEAKLRIAIGERVLVTTLTKRMAEDLTDYLTESGLK
VRYLHSDIDTVERVEIIRDLRLGQFDILVGINLLREGLDIPEVSLVAILDADKEGFLRSE
RSLIQTIGRAARNLNGKAILYADRITDSMHRAMEETEKRRNLQMAFNAEHGIVPQGVRKS
VREMIDGVIQDAPEASTAEEIRLESLLVDEKALAKEIRRLEKQMQDHARNLEFEQAAAAR
DQLTRLKERVLLR
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagccggatttatcgaatttgcagacagcccgtttcagctataccagccctat
ccgccagccggcgatcagcccgccgcgattgaagccttaacgcaaggcgttgatgatggt
ttgatgtatcagacgctacttggcgttacaggatcgggcaaaacctacaccatggccaac
gtgatcgcacgcctggggcgcccggcgctggtgctggcccccaacaaaacactggccgct
cagctgtattcagagtttcgggaattttttccgcgcaatgccgtggaatacttcgtgtct
tactacgattactatcagcccgaggcctatgtgcccacgcgtgatctgttcattgaaaaa
gattcgtccattaatgaacatatagaacagatgcgtctgtcggcaaccaaaagcctgctg
gaacggcgcgataccattattgtgggtacggtttcctgtatttacggtattggtaatccc
ggagattaccacgctatggtgcttgtgcttcgcacgggtgatcacacgccgcgtcaggaa
atcctggcgcgcctggtgtctatgcagtatgagcgcaatgatgttgatttctcgcggggt
accttccgggtgcgtggcgaagtgattgatatcttcccggccgagagtgccgaactggcg
gtcaggctaagcctgtttgatgacgagctggagagtattgacctgttcgatccgctaacc
ggcaaaatccgccagcgcgtcccccggttcaccgtctatccgagttcgcattatgtgacg
ccgcgcgatacggtgttgcgggcgattgaaaccatcaaggaagagctgcgcgatcgcacc
aaattttttgtagataataatcaactggttgaggcgcagcgcatcgaacaacgcacccgg
tttgatattgaaatgctccaggagctgggtttttgcaagggaatcgagaactattcccgc
catctgtccggcgcggcaccgggcgagccaccgccaacgcttatcgattatctgccgcag
gatgcccttatgttctttgatgagagtcactggatgatgggccagttgcgcgccatgtat
cgcggtgaccggtcccgcaaggaaacgctggtgcagtttggttttcgtctgccgtctgcg
atggacaaccggccactgaagatggaagagttcgagcagcgagtccggcagagcattttt
gtgtcggccacgccttcagactatgaaaatgagcattccgacaacgtggtgcgccaggtg
gtacgacctaccggcctggttgaccccatggttgaggtacggccggcgctcactcaggtg
gacgacctgctgggtgaggccaagttgcgtatcgccattggcgagcgggtgctggttacc
acgctgaccaagcgcatggcagaggatctgaccgattatctgaccgaaagcggcctgaaa
gtacgctatctgcattcggatattgatacggtcgagcgggtggaaattatccgcgacttg
cgcctggggcaattcgacattctggtgggcatcaatctgctgcgtgagggtctggatatt
cccgaggtctctttggtggcgattctggatgcagataaggaaggttttctgcgttccgaa
cgcagtctgatccagacgattggccgcgcggcccgaaatctgaatggtaaagccattctg
tatgcggatcgtattaccgactccatgcatcgcgccatggaagagaccgaaaagcgccgt
aatctgcagatggcgtttaatgccgagcacgggattgtgccgcagggcgtgcgcaagtcg
gtccgcgaaatgattgatggcgttattcaggatgcacccgaggcaagcactgccgaagag
atccgtcttgaatcgctgctggtggatgaaaaggcgctagccaaagagattcgccggctg
gaaaagcagatgcaggatcatgcccgcaatctggaattcgaacaagccgcagcggcccgc
gatcaattgactcgactcaaggaaagggtgctcttgcgctga
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