Advenella mimigardefordensis: MIM_c21380
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Entry
MIM_c21380 CDS
T03016
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase rumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
amim
Advenella mimigardefordensis
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amim03009
]
MIM_c21380 (rumA)
Enzymes [BR:
amim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
MIM_c21380 (rumA)
Ribosome biogenesis [BR:
amim03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
MIM_c21380 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
RrnaAD
TRAM
Methyltransf_31
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Methyltransf_32
Methyltransf_23
PCMT
Motif
Other DBs
NCBI-ProteinID:
AHG64217
UniProt:
W0PFF2
LinkDB
All DBs
Position
complement(2437499..2438854)
Genome browser
AA seq
451 aa
AA seq
DB search
MQEIFTIESLDLEARGIARREGKAIFVEGALPAEKVTADIVRRKPSYEIARMTSIIRESS
QRVTPRCPSFGTCGGCLMQHLDVTTQVAIKQRALEDGFRHIAKITIPRVLPPLQGPAWGY
RYRARLSVRKVIKKGKVLVGFHERKSRYVTDMTECHVLPPYVSDMLVPLRELIGNLSIDE
QIPQIEVAVGEDTTALLLRHLAPLTAADIEQLDAFSAHHNVVWWLQSKGPDTVKPLHKEQ
ADSLYYLLPQFGLKMPYKPTDFTQVNYFINRSLIAKALNLLDVQANDRVADLFCGLGNFT
LPLATVAREVVGIEGSSILTDRALQAASQHDLQAKTRFATLNLFEVDVAWLRDLGHFDRM
LIDPPREGAQAVAQALAQLEPRERPTRIVYVSCNPATLARDAGILVHEGGYTLSAAGVVN
MFPHTGHVESIAVFESGAGKVPAATVSSTES
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatatttaccatcgaatcccttgacctggaagcacgcggcatcgcccggcgc
gaggggaaggccattttcgttgaaggtgcgctacctgcagaaaaggtaacggcagatatt
gttcgccgcaagccctcttacgagattgcccgcatgacgtcaatcatcagggaatcaagc
cagcgggtcacgccgcgttgccccagtttcggtacctgtgggggctgtcttatgcagcat
ctggacgtcactactcaggtggcgatcaagcagcgggcactggaagacggtttcaggcat
atcgccaaaatcaccatacccagggtattgccgccgctgcaggggccggcctggggctat
cgttaccgcgcgcgactgtcggtacgtaaagtgatcaagaagggcaaggtgcttgtcggc
tttcacgagcgcaagagccggtatgtgaccgacatgactgaatgtcatgtgctgccgccc
tatgtttccgatatgctggttcccctgcgtgaactgatcggtaatctgagcattgatgag
caaattccacagattgaggtggctgtgggcgaggatacgaccgccttgctgttgcgtcac
ctggcaccgctgactgctgccgatatcgaacagctggacgctttctcggcgcaccacaat
gtggtgtggtggctgcaatccaaaggaccggatacggtcaaaccgctgcacaaagaacag
gccgattcactgtactacctgttgccgcagttcgggctgaaaatgccgtacaagccaacg
gattttactcaggtcaattactttattaatcgttccctgattgccaaagcgctcaatctg
ctggatgtacaggccaatgatcgcgtggcagatttgttctgtggcctgggcaacttcacc
ttgccgctggcgaccgtcgcgcgtgaagtggtggggatcgaaggcagcagcatccttacc
gaccgggccctgcaggcagccagccagcacgacctgcaggctaaaacccgctttgccacg
ctaaatctgtttgaggtcgacgtggcctggctgcgcgatctgggccatttcgaccgcatg
ctgatcgatccgcccagagaaggcgcgcaggccgtggcacaggccctggcgcaactggaa
ccgcgggagcgtccaaccagaatcgtgtacgtgtcctgtaatcctgcgaccctggcacgg
gacgcgggtattcttgtccacgagggtggctatacattgagtgcggcaggggtggtaaat
atgttcccgcatacgggacatgttgaatcgattgcggtattcgaaagcggtgccggtaaa
gtgccagcagcaaccgtcagttccacggagtcataa
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integrated database retrieval system
