Advenella mimigardefordensis: MIM_c23700
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Entry
MIM_c23700 CDS
T03016
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amim
Advenella mimigardefordensis
Pathway
amim00061
Fatty acid biosynthesis
amim00071
Fatty acid degradation
amim01100
Metabolic pathways
amim01212
Fatty acid metabolism
amim02024
Quorum sensing
amim04146
Peroxisome
Module
amim_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
MIM_c23700 (fadD)
00071 Fatty acid degradation
MIM_c23700 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
MIM_c23700 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
MIM_c23700 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amim01004
]
MIM_c23700 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amim04147
]
MIM_c23700 (fadD)
Enzymes [BR:
amim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
MIM_c23700 (fadD)
Lipid biosynthesis proteins [BR:
amim01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
MIM_c23700 (fadD)
Exosome [BR:
amim04147
]
Exosomal proteins
Exosomal proteins of breast milk
MIM_c23700 (fadD)
Exosomal proteins of breast cancer cells
MIM_c23700 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AHG64444
UniProt:
W0PC42
LinkDB
All DBs
Position
2705814..2707490
Genome browser
AA seq
558 aa
AA seq
DB search
MEKIWLKNYPKGVPAEIDLNDYASLAELFNESCERFAESTAYISMGQHMSYAQLHESARR
FAAWLQAQGATRGTRVALMMPNILQYPVALFGTLLAGCTVVNCNPLYTARELEHQLRDAQ
AEFVVVVENFAHTLQDARASLPDLKHVVVATLGDMLGTLKGPILNLIVRHVKKMVPAWSL
PGHIRFADIMKRTNANSFRPVSLNHSDMAFLQYTGGTTGVAKGAVLSHGNLVANLCQAYA
WVKPHAKGNGKDFIVTALPLYHIFALTANCLTFVRLGATNLLILNPRDIPGFIKELRKYP
FTAFTGVNTLFNALMNNAAFKSISFDNLMLTLGGGMAVQRPVAERWKQMTGKPLTQAYGL
TETSPAVTINPLDLREFNGSIGLPVPSTDISIRDDQGKELGVNETGELCVRGPQVMQKYW
NKEAETQKAFEPDGFLRTGDMGYINEDGYIFLVDRKKELIIVSGFNVYPSEIEEVVASHP
SVSEVAAIGVDNGASGEVVKIVVVRKDPSLTEKTLIDFCRSELTGYKVPKVVEFRDELPK
TPVGKILKRELKQAPDRH
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatctggctcaaaaattatccaaaaggcgtccccgccgagatcgatttaaac
gactatgcctcgctggctgaattgttcaacgaaagttgcgaacgctttgccgaatcgacc
gcgtatatttccatgggtcagcatatgagctatgcgcagttgcatgaaagcgcccgccgc
tttgctgcgtggctgcaggcacagggcgctacgcgggggacacgcgtcgctcttatgatg
cccaatattctgcaatatccggtggcgctgtttggtacgctgctggccggatgcactgtg
gtcaactgcaatcccctatatacggcccgggaactggaacatcaactcagggatgcacag
gccgaattcgtagtggttgtagaaaatttcgcgcacacgctgcaagacgccagagcgtcc
ctgcccgacctgaagcatgtggtggttgcaaccctgggcgatatgctgggcacgctcaag
ggcccgattctgaatctgatcgtacggcatgtgaagaaaatggtaccggcctggtctctg
cccgggcatattcgctttgccgacatcatgaagcgcaccaatgcaaacagcttcaggccg
gtcagcctgaaccattccgatatggcgttcctgcaatataccggaggcacgaccggcgtg
gcgaaaggggcagtgctcagtcacggcaatctggtggccaatttgtgccaggcctacgcc
tgggtcaagccacatgcaaaaggcaatggcaaggattttatcgtgaccgccctgccgctt
tatcacatctttgcccttacggccaattgcctcactttcgtgcgacttggcgcaaccaat
ctgctgattctcaacccgcgcgatattcccggctttatcaaagaattgcgcaagtatcca
ttcacggcattcaccggtgttaacacgctgtttaatgcgctcatgaataatgccgctttc
aaatcgatctcttttgacaatctgatgctgaccctcggcggtggcatggcagtgcagcgt
ccggtggccgagcgctggaaacaaatgaccggcaaaccgctaacgcaggcctatggcctg
accgaaacctcgccggccgttaccatcaacccactggatctgcgcgaattcaacggctcc
atcggcctgcccgttccctctaccgatatttcgattcgcgatgaccagggcaaagagctt
ggcgtcaatgaaaccggtgagctctgcgtacggggccctcaggtcatgcaaaagtactgg
aacaaggaagcagaaacacagaaagcctttgaacccgatggtttcctgcgtaccggcgac
atggggtatataaatgaagacggctacatcttcctggtggatcgcaaaaaagaactgatt
atcgtctccggcttcaacgtctatccttctgaaatcgaagaagtggtggcctctcatccg
agtgtcagcgaagtcgcagccatcggcgtagacaatggcgcgtccggtgaggtggtcaag
atagtggtggttcgcaaggatccgtcactcaccgaaaaaacgctgatcgatttttgccga
agcgaactgaccggttataaagtgcccaaagttgtggagttccgcgatgagttgcccaaa
acgccagtaggcaagattcttaagcgcgagttgaaacaggcacctgacaggcattaa
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