Advenella mimigardefordensis: MIM_c24320
Help
Entry
MIM_c24320 CDS
T03016
Name
(GenBank) uracil-DNA glycosylase family 4 domain-containing protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
amim
Advenella mimigardefordensis
Pathway
amim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MIM_c24320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amim03400
]
MIM_c24320
Enzymes [BR:
amim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MIM_c24320
DNA repair and recombination proteins [BR:
amim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MIM_c24320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHG64506
UniProt:
W0PCN1
LinkDB
All DBs
Position
complement(2776193..2777335)
Genome browser
AA seq
380 aa
AA seq
DB search
MAMESSSVSAGAPPVVHPANVTLNPLQLLWLQESGIDRLWGRALTVSAPTEPARAAHNKH
THAAEAAAAAESAHGNEGNEGARSAPSIAARPVASALPSPAAKDTAPDAATVSRNDASPA
RQALAKLREQMQRQRRPAGRVAADTRRTTDEGTGAATAENSAAAISDPMPEAVGPASQGS
QPADTLALRDGPVQWPALAETIRQCRRCGLSEHARQAVPGTGNATARLMIIDQAPGAQDE
ISGEPLSGQAGQLLDNMLAAIGLSRDATFITDVVKCRPMVSRPAEPHEIAACSDYLQQQI
AMVQPSCLLLFGNAAQSVLGTTQSVGQLRETHDLQLTVQGRTIPVVVTFHPNHLMANQAA
KPLAWVDLKRLRKLLQQADA
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaatcttcttcagtttctgctggtgcaccgcccgtggtgcatccggctaac
gttacccttaatcctctgcaattgctctggctgcaggagagcggtattgatcgcctatgg
ggccgtgcgctgaccgtgtcggcaccgacagaacctgcgcgcgcagcacataacaaacac
actcatgctgcagaggctgcagcggcagcagaatcggctcatggaaatgaaggtaatgaa
ggggcgcgttctgcgccctccattgcggcgaggccagtagcgtcggccctgccatcgccg
gcagcaaaagacactgcgccggatgcggctacagtaagccgcaatgacgcttcacctgcc
cgccaggccctggcgaagttgcgcgaacaaatgcagcggcaacgccgacctgccggacgc
gtagctgcggatacgcggcgtacgacagacgagggcaccggtgctgcaaccgctgagaat
agtgccgccgctatctctgatcccatgcccgaggccgttggccctgcgtctcaaggcagt
caaccagcagatacactggcgctgcgcgatgggccggttcagtggccggcactggcggag
accattcgacagtgcaggcgttgcggcctgtccgagcatgcccgccaggccgtacccggc
accgggaatgcaacagcacgcctgatgattattgaccaggcgccaggcgcacaggatgaa
atcagcggtgaaccccttagtggacaggcgggtcagttgctggacaatatgcttgctgcc
attggtctttcccgtgatgcgacatttattaccgatgtagtcaagtgtcggccgatggtg
agccggcctgccgagccgcatgagattgcggcctgctccgactacctgcaacagcagatt
gccatggtgcagccttcatgtctcctgttgttcggtaatgcggcccagtcggtactgggc
acgacgcaatcggtgggacaactgcgtgagacgcatgatctgcaacttaccgtgcagggc
aggacgattccggtagtggtgacatttcatccgaatcatctgatggccaaccaggccgct
aaaccactggcgtgggtcgatctcaaacgcctgcgcaagctgttgcagcaggcagacgcc
tga
DBGET
integrated database retrieval system
