Advenella mimigardefordensis: MIM_c26360
Help
Entry
MIM_c26360 CDS
T03016
Symbol
pcnB
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
amim
Advenella mimigardefordensis
Pathway
amim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MIM_c26360 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amim03019
]
MIM_c26360 (pcnB)
Enzymes [BR:
amim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MIM_c26360 (pcnB)
Messenger RNA biogenesis [BR:
amim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MIM_c26360 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
AHG64705
UniProt:
W0PH23
LinkDB
All DBs
Position
3010893..3012305
Genome browser
AA seq
470 aa
AA seq
DB search
MIKNTIRTFVSRLFAAPVQKDKRRIYSQEQHKIDRRLVSRNAIKVCEVLQQKGYDAFIVG
GAVRDLVLGYEPKDFDVATNATPEEIRPLFRRARIIGRRFQLVHVVFGQEIIETSTFRAP
SQGNQHTDADGRILNDNVFGTQQEDAARRDFTLNALYYDPVREIVIDYHNGVADLKNHLV
RMIGDPETRFREDPVRMLRAVRFASKLNGTIEPATQAPIHQLAGLIKNVPDSRLFDETLK
LLTCGNAIVALEQLRKEGLHENVLPLIDQVLRQPGGEQFVQLTLERTDHRVRSGKSVSPS
FLFAALLWRLVDVNWKKNLARKEHTVPALSQAADLVIDTHISKMAIQRRHTADMREIWFM
QPRFERRIPKQIWRMTEQPRFRAACDFLQLRAACNEFDSVLAQWWMDLADATPGERTEMI
DGLTAEQQAAGPASPPRKRRKRRSNASSKSRTTGGGNTTGNASSGSPAAS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaatactatacgcacattcgtcagccggcttttcgctgctcctgtccagaaa
gataagcgacggatctacagccaggagcagcacaaaattgaccgacgcctggtttcgcgc
aacgctatcaaagtgtgtgaagtactgcagcaaaagggctacgatgcctttatcgtgggt
ggtgccgtgcgcgatctggtcctgggctatgaacccaaggattttgatgtggccaccaat
gccacccccgaggaaattcgcccgctgttccggcgtgcccgtattattggccggcgtttc
cagctggtacacgttgtcttcggccaggaaatcatcgaaacatccacgttccgcgccccg
tcgcagggaaaccagcataccgatgcggatggtcgcattctgaacgacaatgtgttcggc
acgcagcaggaagatgctgcgcgtcgcgacttcaccctgaacgccctgtactacgatccg
gtcagggaaatcgtgattgattatcataacggcgtagccgatctgaaaaaccatctggtg
cgcatgatcggcgacccggaaacgcgcttccgcgaagatccggtacggatgttgcgcgcc
gtccgctttgcctccaaactgaacggcacgatcgaaccggcaacgcaggcacccattcac
caactggcgggtctgatcaaaaacgtaccggactcgcgcctgtttgatgagacactcaag
ctgctgacctgtggcaatgccatcgtcgcgctggagcagctgcgcaaggaaggattgcat
gaaaatgttctgccattgatcgatcaggtactccggcaaccgggcggcgaacaattcgtg
caactcacacttgagcgtaccgaccatcgcgtccgctcaggcaaatcggtcagcccgagc
tttctgtttgccgcgttgctgtggcgcctggttgacgtcaactggaagaaaaacctggcg
cgcaaggaacacacggtacccgctctgagtcaggcggccgatctggtcatcgacacccac
atcagcaaaatggccattcagcgtcggcatactgcagatatgcgtgaaatctggtttatg
cagccccgctttgaacgccgcatccccaaacagatctggcgcatgacagaacagcctcgt
tttcgtgctgcctgcgacttcctgcaattgcgtgccgcctgcaacgagtttgatagtgtg
ctggcgcaatggtggatggatctggccgacgccactcccggcgagcgtactgaaatgatt
gacgggcttacggcagaacagcaagcagcaggacctgcgagcccgccacgcaagcgacgc
aaacggcgcagcaatgcgagcagcaaaagcagaacgaccggcggcggcaacacaaccggc
aatgcatcttccggcagtcccgctgcttcataa
DBGET
integrated database retrieval system
