Advenella mimigardefordensis: MIM_c28660
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Entry
MIM_c28660 CDS
T03016
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amim
Advenella mimigardefordensis
Pathway
amim03030
DNA replication
amim03430
Mismatch repair
amim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MIM_c28660 (dnaQ)
03430 Mismatch repair
MIM_c28660 (dnaQ)
03440 Homologous recombination
MIM_c28660 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amim03032
]
MIM_c28660 (dnaQ)
03400 DNA repair and recombination proteins [BR:
amim03400
]
MIM_c28660 (dnaQ)
Enzymes [BR:
amim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MIM_c28660 (dnaQ)
DNA replication proteins [BR:
amim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MIM_c28660 (dnaQ)
DNA repair and recombination proteins [BR:
amim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MIM_c28660 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
DUF2214
Motif
Other DBs
NCBI-ProteinID:
AHG64931
UniProt:
W0PDU0
LinkDB
All DBs
Position
complement(3269333..3270055)
Genome browser
AA seq
240 aa
AA seq
DB search
MRQIILDTETTGFDPAEGDRIVELGCVELIDRQFTGNNLHIYFNPDRESSPGALEVHGLT
TEFLSQFNRFEDEAARIFEYLKGTEIYIHNAAFDVKFMNAEFARVGMPPLDQSAAAIHDT
LAMAREQYPGKRNSLDMLCERLGVSNAHRTLHGALLDAELLAEVWLAMTRGQFGLVMEHS
DQPRQEAGQPAVATFDASILRVEVATEAEIAEHAAYLDGLDQAAGGLSLWRKLTNPPPAA
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcgacaaattattctcgatacggaaaccaccggctttgatccggccgaaggcgaccgg
atcgtcgaactcgggtgtgtggaactgatcgaccgtcagttcaccgggaataatctgcat
atttatttcaatcctgacagggaaagctcgcccggcgcgcttgaagtgcacgggctgacc
actgaatttctgtcccagttcaatcgctttgaagatgaagcagcgcgtatttttgaatac
ctgaaagggacagaaatttacattcataatgccgcgtttgacgtcaagttcatgaatgcg
gagtttgcccgggtgggcatgccaccgctggatcagagtgcggcggcaattcacgatacc
ctggccatggcgcgggaacagtacccgggcaagcgcaacagtctggatatgttgtgcgag
cggctgggtgtttccaacgcgcaccggaccctgcacggcgccttgctggatgccgagctg
ctggctgaagtctggctggcgatgacccgtggccagtttggcctggtcatggaacacagc
gatcagccgcgccaggaggcaggccagccggcggtggcaacgtttgatgccagtattctg
agggtcgaagtggccacagaggcggagattgctgagcacgccgcttatctggatgggctg
gatcaggctgccggtggtctcagtttatggcgcaagctcaccaaccctccgcctgccgcc
tga
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