Advenella mimigardefordensis: MIM_c29220
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Entry
MIM_c29220 CDS
T03016
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
amim
Advenella mimigardefordensis
Pathway
amim00260
Glycine, serine and threonine metabolism
amim00460
Cyanoamino acid metabolism
amim00630
Glyoxylate and dicarboxylate metabolism
amim00670
One carbon pool by folate
amim00680
Methane metabolism
amim01100
Metabolic pathways
amim01110
Biosynthesis of secondary metabolites
amim01120
Microbial metabolism in diverse environments
amim01200
Carbon metabolism
amim01230
Biosynthesis of amino acids
amim01240
Biosynthesis of cofactors
amim04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MIM_c29220 (glyA)
09102 Energy metabolism
00680 Methane metabolism
MIM_c29220 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MIM_c29220 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MIM_c29220 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MIM_c29220 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MIM_c29220 (glyA)
Enzymes [BR:
amim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MIM_c29220 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AHG64986
UniProt:
W0PDY7
LinkDB
All DBs
Position
complement(3334930..3336174)
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AA seq
414 aa
AA seq
DB search
MFDRSLTLDKVDPELWSAIQQENTRQEQHIELIASENYTSPAVMQAQGTQLTNKYAEGYP
GKRYYGGCEFVDIAEELAIKRLKELFGAEAANVQPNSGSQANQGVYMAVLKPGDTVLGMS
LAEGGHLTHGASVNASGKLYNFISYGLDENEVLNYEQVEQLAKEHKPKMIVAGASAYSLK
IDFERMARIAHDNGAYLMVDIAHYAGLVAGGQYPNPVPHADFVTSTTHKSLRGPRGGVIM
MKAEHEKIINSAIFPGIQGGPLMHVIAGKAVAFKEALSPEFSDYAKQVVANAKVLADTLV
KRGLRIVSGKTESHVMLVDLRAKGITGKVAEARLGDAHITVNKNAIPNDPEKPFVTSGIR
LGTPAMTTRGFTEAEAELTANLIADVLDNPDDEANIAAVRAKVNELTARFPVYK
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaccgctcgctaactcttgacaaggtagatcctgaactctggagtgccattcaa
caagaaaacacccgtcaggagcagcacatcgagctgattgcttctgaaaactacaccagc
ccggcagtcatgcaggcacaaggcacgcaactgaccaacaagtacgcagaaggctatcct
ggcaagcgctactacggtggctgcgagttcgtcgatatcgctgaagagctggccatcaag
cgtctgaaagaactgttcggtgccgaagcggccaacgtgcagccaaactccggctcacag
gccaatcagggtgtgtacatggccgtgctcaaacccggtgataccgtactgggtatgagc
ctggcagagggcggtcatctgacgcatggtgcatcggtcaatgcctcaggcaagttgtac
aatttcatctcttacggcctggacgaaaacgaagtgctcaactacgaacaggttgagcaa
ctggccaaagaacacaagccgaaaatgattgtggcgggtgcgtctgcatactccctgaaa
attgatttcgagcgcatggccagaatcgcccatgacaatggcgcatacctgatggttgac
attgctcactacgcaggtctggtcgccggcggtcagtatccaaacccggttcctcacgcc
gatttcgtgacgtcaacaacgcacaaatccttgcgcggtccgcgcggcggcgtcatcatg
atgaaagcagagcatgaaaaaatcatcaactccgccatcttccctggtattcagggcggg
ccactcatgcacgttattgcgggtaaagcagtggctttcaaagaggcgctcagcccggaa
tttagcgactacgcaaaacaggttgtggccaatgccaaagtactggcagacacactggtt
aaacgtggcctgcgtattgtttccggcaaaaccgagagccatgtcatgctggttgacctg
cgtgccaagggtattaccggtaaggttgccgaagcccgtctgggcgatgcgcatatcact
gtaaacaaaaacgcgattccgaacgatccggaaaaaccgtttgttaccagcggcattcgt
ttgggtacgccagccatgaccactcgcggctttaccgaggccgaggccgaactgactgcg
aatctgattgccgatgtgctggataacccggacgatgaagcaaacatcgctgcagttcgt
gctaaagtgaacgaacttacagcgcgcttcccggtttacaaataa
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