Advenella mimigardefordensis: MIM_c30330
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Entry
MIM_c30330 CDS
T03016
Name
(GenBank) putative Ku-type ATP-dependent DNA helicase
KO
K10979
DNA end-binding protein Ku
Organism
amim
Advenella mimigardefordensis
Pathway
amim03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
MIM_c30330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amim03400
]
MIM_c30330
DNA repair and recombination proteins [BR:
amim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
MIM_c30330
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AHG65097
UniProt:
W0PGY0
LinkDB
All DBs
Position
complement(3450547..3451701)
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AA seq
384 aa
AA seq
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MARPIWNGTISFGLLNIPVALMPGERRIDLHFRMLDSRDNAPVRYERVNADTGDEVPWKD
IVKAFEYSKGNYVVLEPDDIRDAAPQSKESVDVEAFVDASAIGPAYFEKPYVLVPGKKAE
KGYVLLRETLRDAGKIGIARVVIRTREYLCAVMPQGDALMLILLRYPQELIDVQDYRIPE
GKLSEYRISRQEMDMASQLISSMEVDWQPDQYKDEFRQRLTDVIKKRMKANKVSHRPDDD
LDEAAVPENAATNVVDFMSLLKQSLATNKRTPPKSASSRSAAAGSDSTADSKSKKAPAKA
TQASAPRASKAGNGKASSPKANHGKTNKDKAGSGKATGKSAATTGKAARAASKTSSKTTT
RKSARSTGTASGSRKRATGTKKAA
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcccgatctggaatggtacgatttcctttggattgttgaatatcccggtggct
ttgatgcccggggaacggcgcattgatctgcattttcggatgctggactcgcgtgataat
gcgccggtacgctatgaacgggtcaatgccgacacgggcgacgaggtaccatggaaggat
atcgtcaaggcgtttgaatatagcaagggcaattacgtcgttcttgaacccgatgacatt
cgcgatgcagcgccgcaaagcaaggagtcggtcgatgtagaggcatttgttgatgccagt
gcgatcggcccggcctatttcgaaaaaccctatgtgctggtacccggaaaaaaggcggag
aaagggtacgtcttgttgcgcgaaacgctgcgcgatgctggcaagatcgggatcgcacgt
gtggtcatacgcacgcgtgaatatctgtgtgccgtcatgccgcaaggcgatgcgcttatg
ctgattctgctgcgatatccgcaggaactcatcgatgtgcaagactaccggattccggaa
ggcaagttgagtgagtaccggatttcccgtcaggaaatggacatggccagccaattgatt
tcatccatggaagtggactggcaaccagaccaatataaggatgagttccggcagcggctt
acagatgtgatcaaaaaaagaatgaaggccaacaaggtaagccatcgtccggacgacgat
ctggacgaggcagccgttccggagaatgccgccaccaacgtcgttgacttcatgtctctg
ctcaagcaaagtctggcaaccaataagcggacgccgccgaagtcggccagctcgcgatct
gctgcggccggcagcgacagcacagctgacagtaaatcaaaaaaagcgcctgcaaaggca
acgcaggcgtctgcaccgcgcgcctctaaagcgggcaacggtaaagcgagcagtccgaaa
gcgaaccacggtaaaacgaataaggataaggccggcagcgggaaagcgactggcaaatca
gccgcaaccaccggaaaagcagccagggcagcaagcaagacaagcagcaagacgacaacc
aggaaaagcgcaaggtcaaccggcactgcttcaggatcacgcaagcgggcgactggcacc
aaaaaggcggcatag
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