KEGG   Advenella mimigardefordensis: MIM_c33390
Entry
MIM_c33390        CDS       T03016                                 
Name
(GenBank) putative type VI secretion system YD repeat-containing Rhs element Vgr protein
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
amim  Advenella mimigardefordensis
Pathway
amim03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:amim00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MIM_c33390
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:amim02044]
    MIM_c33390
Secretion system [BR:amim02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   MIM_c33390
SSDB
Motif
Pfam: Phage_GPD RHS_repeat Gp5_trimer_C DUF6531 RHS Phage_base_V TEN_YD-shell DUF6484 OCRE
Other DBs
NCBI-ProteinID: AHG65400
UniProt: W0PIQ6
LinkDB
Position
complement(3829431..3835328)
AA seq 1965 aa
MSANINIINPDRLIKVSIAADNAEFLFDAMQGTDGMSTLSDYTVRLLHRSMQVDVRALLG
KSLTLTINTAAAPRHINGVIASFALVGQEGDVDRYFVYEARVVPWFWLATHKKEFRIYQN
QSVPETIKQVLSPYGYAFEFDLVETYAPRVYCVQYDETDFQFVSRLLEAEGIHYYFRHEQ
EKHTLVMSDEIQSHKPVDGYEHVPYFTEDKLALPQQDYMTHVAVYQDLRPGQYITNDYNF
TTPKADLAAHHGIELEHEHNQAEVYEWPGNYEDDPLGERYARQRMQEQHHVRDTRTLRST
ARGVATGSLFNLVRCPRTEENREYVVLGTRYDLKENNYHSVNSPEEAAQNGRLCLFDLTV
QCATLPFRPPRTTRKPRTLGPQTAVVVGPEGKEIWTNEYGQVKVHFHWDRYDKKDENSSC
WIRVSSSWASGNFGAIQVPRIGDEVIVDFLNGDPDAPIITGRVYNAAMMPPWKLPDNATQ
MGLYSRSSPGGNYETANAIRFEDKKGQEQLWIHAERNQDVEVEHNDTLTVGNNKTDKIRW
HWKLNTGGFKQETVNLASVQSVGLGKMMNVGMAYNVNVGGLYLRNIGLQMASTVGMDRTD
RVVQSWTSDVGHVYSVTVRGKAVETTVRKDAQRPLIATPDFQPQLPSAVESSDANQIRIT
DGGQASLSGAQYAKLIGPGGVITIDEAGIRIRGKGIYLQAPIISMTGGDAQGLVPVTEAD
CAECAKRTTTPHPVDVATGQKVLVTDDFMLPGRMPIRWSRMYRSADQREGHLGIAWKLPY
STEIRQGAAGMVYFDADGRQLNFPNLAVGEEHFHPIEKYTLQRTEDNASHPRYRICFTNG
TEEHYVRHPKEPKRWQLHRITTRDGQWLQIQYTVQGWLKQLNNNRYTVLSELDTRGRILA
LYLAGDEDGQALARYSYDEQGDLVRAVDRAARVWRYRYAHHLLNEYRTPSGAVHISEWDG
DTPQARCVRTYAYAENAAAPGAKPMITRDTRFTYLPASKTTQVTDGLGNTTEYHYNGLWA
VDRVTHPDGSVEQIHFDETGSISGHTDALGRSTRIVNNAAGSPTSVIDAAGNVTSLSYNA
QNQPVHITDPAGHVWQRSYDEAGNLASETDPLGHSTSYAYANGLPVSRTDPMGNATKMQW
DEAGQLVSKVDCSGNQTKYQYDSLGQLTATTNPLGQVSEQQWDQAGRVIGNKPVGRGWWR
IEHDKAGRPIANTDPLQRVTQTRWDAYNQRVEVINAAKGNLLFEYDRIGQLIKITNAKGE
STTLVYDSRGRRVSETGFDGRRQIFKYNAAGELIERIDIGNDGQITTTYVYDALGRPVER
RVSDGMHVSYRYDARSRLTQAQVVAMPGEQPHRITYEYDAAGHKIAEMQAHHGRVWRITH
ELDALGNRIASRIPSAGKLKWLRYGSGHIHEMLLDEDTVASFERDGLHREVLRNQGRVSH
QFSYSEAGWLEAHLWQDLDEQGKQLGQPRGWRAWKYDVAGQLLNLRDVYRGTKSYQYDAL
ARVTEVSQCVERLGNWYENFAYDQADNLIAIAKSQGYEVPVQFGQGQAPGNRLLRLFNSQ
IAEQYLSYDYDGHGNRVSQMTGISTPISASAIESSSVETAETIEPGSGSEPLAKSTRYHY
DGDHQLIQIDHPGGAKIQYRYDAFGRRIAKHHTTHNNDSQTTLFMWDGDWMIQELAAAND
SHEDQVKTFIRHPDFLGPLTLLSGHRRYHHYVTDHLGTPQEMYDESRRIVWAAQMDTYGR
VTKQIVADVDNPIRFPGQYYDAESGLHYNRFRYYDAEAGRYINQDPIGLQGGSNQYQYVA
NNPLTAVDPMGLEKWDWNGVGDTAVCSYYDDMFKAHPKCDYYEAAGDICRGKNGAVNGMS
NLGISTAWAIGNSSDSQATILEKIRKSLVESDKAARSAGKVDSSTDCVYGDDIDAYHYAA
FKGAGLSSWFYGGKVWPQNVWPNPVPVDIRKYEYLKRPYIEFAPY
NT seq 5898 nt   +upstreamnt  +downstreamnt
atgtctgcgaacataaatataattaaccctgaccggctgatcaaggtctccattgcggct
gataatgccgaattcctgtttgacgccatgcaaggcacggatgggatgtctaccctttcc
gactataccgtacgcctgctgcatcgttcgatgcaggttgatgtgagggcattgcttggt
aaatccctgactttgaccatcaacacggcggcagcgccccggcatatcaacggcgtgatc
gccagttttgcgctggtgggccaggaaggcgatgttgatcgttactttgtgtacgaagcg
cgcgtggtgccttggttctggctggcgacacacaaaaaagaattccgcatctaccagaac
cagtctgtgccagagaccatcaagcaggtgctctcgccctatgggtatgcgttcgagttc
gacctggtggagacctacgcgccgcgggtctattgcgtgcagtatgacgaaactgatttt
cagtttgtgagcaggttgctggaggccgaaggcattcattattactttcgtcatgagcag
gaaaaacataccctggtcatgagcgatgaaatccagagtcacaagccggtagacggttac
gagcacgtgccgtatttcaccgaagataaactggcgttgccgcagcaggactacatgacg
catgtggcggtgtatcaggatttgagacccgggcaatacatcaccaacgattacaacttc
accacaccgaaagcggatctggcagcccaccatgggattgagctggagcacgagcataat
caggccgaagtgtatgaatggccgggcaattacgaggacgatcccctgggtgagcgctat
gcccgccagcgcatgcaggagcagcatcatgttcgtgatacacgaacactgcgcagcacg
gcacgcggtgtggcaacgggttcgttgttcaatctggttcgttgcccgcgcacagaagag
aatcgtgagtatgtggtgctgggcacccgctatgatctgaaagaaaacaactaccattca
gtaaactcgcccgaagaggcggcacaaaatggccggctctgcctgttcgatctcaccgtg
caatgcgccactttaccgtttcggccaccgcgcacgactcgcaagccgcgtacactggga
ccacaaacagctgtagtggtgggacctgaaggcaaagaaatctggactaatgaatatggc
caggtcaaggtgcattttcactgggaccgatacgacaagaaagacgagaacagttcatgc
tggatccgggtgtcgagcagttgggccagtggtaactttggcgcgatccaggtgccaaga
atcggcgatgaagttattgttgacttcctaaacggggatcctgacgcgccgatcatcaca
ggccgggtatacaacgcagcgatgatgccgccgtggaaactgccagataatgccacgcag
atggggttgtattcacgttcgtcccccgggggaaattatgagacggccaatgcaatccgc
ttcgaggacaagaaggggcaggaacaactgtggattcatgccgagcgcaatcaggacgtt
gaggtcgaacacaacgacacgctgacggtcgggaacaacaagaccgacaagatccgctgg
cactggaagctgaatacgggaggttttaagcaggaaaccgtcaatttggcctcggtgcag
agcgtgggactgggcaagatgatgaatgtgggcatggcctacaacgtgaatgtgggcggc
ctgtacttgcgcaatattggcctgcagatggccagtacagtgggaatggacagaactgac
cgggtagtgcaaagctggacttcggatgtcggtcatgtgtattcggtgacggtgcgcggc
aaggcggtagagaccacggtcaggaaagatgcgcagcgtcccttgattgccacgccggat
tttcagccgcaattgccaagtgcggtggaaagctcagacgccaatcagatccgaattacc
gacggcggccaggcgagcttgtcaggtgctcaatatgccaagctgattggcccgggtggc
gttatcacaattgacgaagccggaatccgcatccggggtaaaggcatttacttgcaggcg
ccgatcatcagtatgacggggggcgatgcacaagggctggtgccggtcaccgaggccgat
tgcgccgagtgtgccaagcgcacgacaacgccccatccggtggatgtagccacggggcag
aaggtactggttaccgatgattttatgttgccgggccgcatgccgatacgctggagccgg
atgtatcgcagcgcggaccagcgagaagggcatttgggcatcgcttggaaactgccttac
tcgacagaaatcagacagggcgcggcaggcatggtgtatttcgatgccgatggccgccaa
ttaaacttcccgaatttggcggttggtgaggaacatttccatccgatagagaaatacacg
ctgcaacgtactgaagataatgcttcgcatccgcgctaccgaatttgttttaccaatggc
actgaagaacactatgttcgacatcccaaagagcctaagcgttggcaattacatcgaatc
acaacgcgtgatggacaatggctgcagattcagtacactgttcaaggatggctcaagcag
ttaaataataaccgatacaccgtgcttagtgagctggatacacggggaaggattttggcg
ttgtatctggctggcgatgaggatggacaggcactggctcgctattcttacgatgagcaa
ggtgatctggttcgtgcggtagacagagctgctcgtgtctggcgttatcggtatgcgcat
catttacttaacgagtatcgtacgccttcgggcgcggtacatatctcggaatgggatggc
gacacgccgcaggcgcgatgcgtgcgcacctatgcgtatgcggagaatgccgcagcgccg
ggagccaagccgatgatcacgcgtgatacacgctttacgtatctgccagcctccaaaacg
acgcaggtcaccgatgggctgggcaacacaacagagtaccactataacgggctgtgggcg
gtggatcgcgtgacgcatccggacggcagcgtggagcaaattcatttcgacgagacgggc
agcatctcaggccatacggatgcgctaggacgcagcacacggattgtgaacaacgcggca
ggcagcccgacatcggttatcgatgcggcaggaaacgtgaccagcctatcctataacgca
cagaatcagccggtgcatattaccgatccggcaggccatgtgtggcagcgcagttatgac
gaagcgggcaacctggccagtgagaccgatccactgggtcatagcacgagctatgcctat
gccaatggcctgccggtttcgcgcactgatcccatgggcaatgccaccaagatgcaatgg
gacgaggccgggcaattagtatccaaggttgattgctccggaaatcagacgaaatatcaa
tatgattctcttggccaattgactgcgacgaccaatccgctggggcaggtcagcgaacag
caatgggatcaagcaggtcgtgttatcggtaataagccggttggaagaggctggtggcgt
attgagcatgataaggcgggacggccgattgcaaacactgatccgctgcagcgtgtaacg
cagacccgctgggatgcgtataaccagcgcgtcgaagtcatcaacgcggcaaaaggcaac
ttgttgtttgagtatgaccgaatcgggcaacttatcaaaattaccaatgcaaaaggtgaa
tctactacgctggtttatgactctcgcggcagaagagtctctgaaacaggctttgacggt
cggcgtcagatatttaaatacaatgctgcaggggagctgatcgaacggattgatattggt
aatgacggtcagattactactacctatgtttacgatgcgctgggacggccagtcgagcgg
cgcgtcagcgacggtatgcatgtgagttatcgctatgatgcacggagccgtttaacccag
gcgcaagtagttgcgatgcctggcgaacagccgcatcgaattacctatgaatatgatgca
gctgggcacaagatagccgaaatgcaggcacatcatggccgcgtatggcgcatcactcat
gaattggacgcgctaggtaatcggattgccagccgaattccctctgcggggaaacttaaa
tggttgcgctacggttctggacatatccatgagatgttacttgatgaggataccgttgcc
agtttcgaacgggacggattgcatcgcgaggtattgagaaaccaggggcgagtttctcat
cagtttagttatagcgaagccggttggcttgaggcgcacttgtggcaagacctggatgaa
caaggcaagcagctaggccagccgcgcggctggcgggcttggaaatatgatgttgcggga
cagttattgaatctgcgagatgtatatcgcggaaccaagagctaccagtatgatgcactg
gcgcgagtcactgaagtcagccagtgcgttgaaaggttgggaaattggtatgagaacttt
gcctatgaccaggcggacaacttgattgccattgcgaaaagccaaggctatgaggttccg
gtgcagttcggccaaggccaggctccagggaatcgactcttacgactatttaactctcag
attgcagagcagtatttatcgtatgactatgatggtcatggaaaccgggtgtctcaaatg
acgggaatctcaactcccatatcggcttccgcgattgaatcttccagtgtcgagactgca
gaaacgatagagccgggctctggcagtgagccgttagcaaaaagcacgcgctaccattat
gatggggatcatcaattgattcagattgatcatccgggtggggccaagatacagtatcgt
tatgatgcctttgggcgtcgtatcgccaaacatcatacgacgcataataatgactcgcaa
accacgctcttcatgtgggacggcgattggatgattcaggagctggcggcagcaaatgat
tcgcatgaggatcaggtaaagacatttattcgccatccggatttcttggggccgctgacg
cttttaagcgggcatcgacgttatcatcattatgttaccgatcatctgggtacgcctcag
gaaatgtatgatgagtctcgtaggatcgtgtgggctgcgcaaatggatacctatggccga
gtgaccaagcagattgttgccgacgttgataatcccattcggttccctggtcaatattat
gatgcggagtcaggtctgcattacaatcggttcaggtattatgacgcggaagcgggccgt
tatatcaatcaggatccaattggattacaaggcggaagtaatcagtaccaatatgtggct
aataatccgttaacggctgttgatcctatggggcttgaaaaatgggactggaatggagtc
ggtgatactgcagtgtgtagttactatgatgatatgtttaaggctcatccaaaatgtgat
tattatgaagcagcgggggatatttgtagagggaaaaacggtgctgtgaatggtatgtcg
aacttgggtatttctaccgcatgggctataggaaactcaagcgactcacaggcgaccatc
cttgaaaagattcgtaaatctcttgttgagtccgataaggcggcacgttctgcagggaag
gtagatagttctaccgattgtgtttatggtgatgacattgatgcttatcattatgcagca
tttaagggagcaggtttgagttcttggttctatggaggaaaggtatggccacaaaatgta
tggcctaatcctgtacctgttgatattagaaaatacgaatatctaaagcgcccctatatt
gagtttgcaccctattga

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