Advenella mimigardefordensis: MIM_c34040
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Entry
MIM_c34040 CDS
T03016
Name
(GenBank) putative transcriptional regulator NifA, Fis family
KO
K02584
Nif-specific regulatory protein
Organism
amim
Advenella mimigardefordensis
Pathway
amim02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MIM_c34040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amim03000
]
MIM_c34040
Transcription factors [BR:
amim03000
]
Prokaryotic type
Helix-turn-helix
Other families
MIM_c34040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
Mg_chelatase
AAA
AAA_2
GAF_3
AAA_16
EHN
Motif
Other DBs
NCBI-ProteinID:
AHG65465
UniProt:
W0PIU5
LinkDB
All DBs
Position
3915326..3916942
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AA seq
538 aa
AA seq
DB search
MSQAPPTPTDDDGPAYWRSQEMLLLQNIIALSDKKFSYEAVYKEILHLLSELLGLNRGRI
VLQTPGAREGKIRYSYGLTREEAEKGVYAFGEGITGRVLATGQLAVVQDIDNEPLFLFRS
VERRHLPQEHVAFIALPITVGQQVKGALVCHRIRTRSRALADDLTILRILVTYIGQLMHL
EGHIEEKNRELEHYNQLLHGSHYDISHYGIVGNSPELFRAISELERVSDSTASVLLLGQS
GTGKELFARALHLASPRQDKPFIKVNCAAIPESLFESELFGYEKGAFTGATTQRKGLFEQ
ADEGTIFLDEVGELPLSMQGKLLRTLQEGTITRLGGKQELKIDVRLVAATNRNLGQEVQN
GRFREDLYYRLNVIPIQLPSLAERKSDIPALALHFLNKFNQANQRNLNLKPDALTLLQNH
HWPGNIRELSNVMERMVLLSDKLVLTADDLKPFMSINRVDAPSPSPSPSPASAVNHLPIH
APPESLPTVIRPYASVNSHSGQTLLEAVRLAGGNKSRAAQNLGLTVRQLTYRMQKMGL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagcgccccctaccccaaccgacgacgatggcccagcgtactggcgctcccag
gaaatgctgttgctgcagaatatcattgcgctttccgataaaaaattctcttatgaagcc
gtgtataaagagatattgcatctgctatcggagttgttaggcctgaatcgcggccgtatc
gtgctgcaaaccccaggcgcaagggagggcaaaatccgctattcatatggcctgacccgc
gaggaagcggaaaaaggcgtctatgcctttggcgaaggcattaccgggcgcgtactggca
accggccagcttgccgtcgtgcaggacatcgataacgagcctttgtttctttttcgttcc
gttgaacgcaggcatttgccgcaggagcatgtcgcgtttattgccttgccgattacggtc
ggacagcaggtcaaaggggcgctggtttgccaccgcatccgcacgcgttcgcgcgcactg
gccgatgatctgaccattcttcgcatattggtcacttacattggtcagctgatgcatctt
gaagggcatatcgaagaaaaaaatcgcgagctggaacattataatcagctgctgcacggc
agtcattatgacatttcgcattacggcatcgtgggcaattcacccgagctgttccgggcc
atttccgaactggaacgggtctcagactccacggcaagcgtgttgctgctgggacaatcc
ggtaccggcaaggagttgtttgcccgggcgctgcatctggccagcccgcgtcaggacaag
ccgtttatcaaggtcaattgcgcggccattcccgaatcgctgttcgagagcgagctgttt
ggctacgaaaaaggtgcatttacgggtgccaccacacagcgcaaggggttatttgaacag
gcagatgaaggcacgatttttctggatgaagtcggcgagctaccgttgagcatgcagggc
aaattattgcgcacattgcaggaaggcacgattacgcgcctgggaggtaaacaggaactg
aagattgatgtgcgcctggttgctgccaccaatcggaatctgggccaggaggtacaaaac
ggccgctttcgggaagatttgtattaccgcctgaatgtgattccgattcagcttccttcg
ctggcagagcgcaaaagcgatattccggcactggccctgcattttctgaacaagtttaat
caggccaatcagcgtaatctcaatctgaagccggatgcgctcaccctattgcagaaccac
cattggcccggcaacatacgggaactttcaaatgtcatggagcgcatggtgctgctgtcc
gacaaactcgtcctgacggcagatgatctgaaacccttcatgagcatcaacagagtcgat
gccccatcgccatcgccatcgccatcgccagcctcagccgtgaaccacctgcccatccat
gcgccaccagaatcgttgccaactgtcatacgaccttacgccagcgtaaactcacactcc
ggccagaccttgctggaagcggtgcgactggcgggcggcaataaatcccgggctgcgcag
aatctcggattaacggtacggcaactaacctaccgcatgcagaaaatgggactctga
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integrated database retrieval system
