Advenella mimigardefordensis: MIM_c38830
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Entry
MIM_c38830 CDS
T03016
Name
(GenBank) cyclic nucleotide-binding domain-containing protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
amim
Advenella mimigardefordensis
Pathway
amim02020
Two-component system
amim02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MIM_c38830
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
MIM_c38830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amim03000
]
MIM_c38830
Transcription factors [BR:
amim03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
MIM_c38830
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
Crp
HTH_24
Phage_rep_O
Motif
Other DBs
NCBI-ProteinID:
AHG65934
UniProt:
W0PFZ1
LinkDB
All DBs
Position
complement(4485972..4486679)
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AA seq
235 aa
AA seq
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MSDRSIYHKSQLPELFSDYPWFQSLEPDHQALVMATARAESVQQDAWLARRGELSDDWFG
VHSGLLKLAIYDESGKSCTFSGVPPGGWFGEGSVIKHELRKYDVVAIQPSLVLCVPASTF
EALLSASLSFSHFVIGQLNERMGEFIASIQNQRLLQADARVAQSLAQLFNPALYPSTDLA
LEISQEELGYLTGLSRQRVNRALQNLQQQKILIQAYSKIRILDLAQLRAYGLAQM
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcgttctatctatcacaaaagccagttgcccgaattgttcagcgactatccc
tggtttcagtccctggagccggatcatcaggcgctggtgatggctaccgccagggccgaa
tccgtccagcaggatgcctggctggcgcgtcgtggcgaactgtcggatgactggttcggg
gtgcatagcggtttgctcaagctggccatttatgacgaatccggcaaaagctgtactttt
tccggtgtccctcccggcggctggttcggcgagggcagtgtcatcaagcatgaattgcgc
aaatacgatgtggtcgcaattcagccgtcgctggtgctgtgcgtgccggcaagcaccttc
gaggcgctcctgtcagccagtttgtctttttcacattttgtgattggccagttgaacgag
cgcatgggcgagttcattgcctcaatccagaaccagcgcctgttgcaggccgatgcccgt
gtcgcccagtcactggcgcaactgttcaatccggctctttatccctccaccgatctggcg
ctggagatctctcaggaagaactgggatatctgaccggcctatcgcggcagcgtgtgaat
cgcgcattgcagaacctgcagcagcagaaaatattaatccaggcctacagcaaaatccgc
attctcgacctggcgcaattgcgcgcctacggcctcgcgcagatgtga
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