Advenella mimigardefordensis: MIM_c38940
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Entry
MIM_c38940 CDS
T03016
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
amim
Advenella mimigardefordensis
Pathway
amim03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MIM_c38940 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amim03021
]
MIM_c38940 (rpoA)
03400 DNA repair and recombination proteins [BR:
amim03400
]
MIM_c38940 (rpoA)
Enzymes [BR:
amim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MIM_c38940 (rpoA)
Transcription machinery [BR:
amim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MIM_c38940 (rpoA)
DNA repair and recombination proteins [BR:
amim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MIM_c38940 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AHG65945
UniProt:
W0PK65
LinkDB
All DBs
Position
complement(4498266..4499249)
Genome browser
AA seq
327 aa
AA seq
DB search
MSQGFLKPRSIEVTPVTENHAKVVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQITG
VVHEYSTLTGVREDVVDIVLNLKGIVFKLNNREEVTVTLRKSGSGPVLASDIDLPHDVEI
INPNHVIATLTDNGKLEMQIKIEQGRGYVAGNMRALTDERSHTIGRIQMDASFSPVRRVS
YAVESARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMDQISVFAALEGASDTFETP
VRGVPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNE
IKEVLAARGLTLGMKLESWPPLGLERP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaggttttttgaaaccccgttccattgaagtgactccggttaccgaaaaccac
gccaaagtggttatggagccgtttgaacgtggttatggccacacactgggcaacgcgttg
cgtcgcattctgctgtcttccatgaccggctacgcgccgaccgaagtgcagatcacaggt
gtggtacatgagtactctacgctgacaggcgtgcgtgaagatgtcgttgacatcgttctg
aacctgaaaggtattgtattcaaactgaacaatcgtgaagaagtgaccgttacactgcgc
aaatctggctccggcccggttctggccagcgatatcgatctgcctcacgacgttgaaatc
atcaacccgaatcatgttattgctacactgacagacaacggcaagctcgaaatgcaaatc
aagatcgagcagggtcgtggttatgttgccggtaatatgcgtgcgctcacagatgagcgt
tcacacaccatcggccgtattcagatggatgcttctttcagcccggttcgccgcgtcagc
tacgctgtcgaaagcgcccgtgttgaacaacgcaccgacctggacaagctggtgctggac
attgaaaccaacggtgtgatttctcctgaagaagccgtgcgtcagtctgcccgtatcctg
atggaccagatttctgtatttgcagccctggaaggcgccagcgatacattcgaaacaccg
gttcgcggcgtaccgcaaattgatccggttctgctgcgtcctgttgacgatctcgaactc
actgttcgttctgccaactgcctcaaagcagaaaatatctattacattggtgatctgatc
cagcgcactgaaaacgagctgctcaaaacaccgaacctgggccgtaagtccctgaatgaa
atcaaggaagtactggctgcacgcggcctgaccctgggcatgaagctggaaagctggcct
ccactgggtcttgagcgtccttaa
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