Aurantimicrobium minutum: AUMI_113820
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Entry
AUMI_113820 CDS
T05175
Name
(GenBank) DNA topoisomerase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
amin
Aurantimicrobium minutum
Brite
KEGG Orthology (KO) [BR:
amin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amin03032
]
AUMI_113820
03400 DNA repair and recombination proteins [BR:
amin03400
]
AUMI_113820
Enzymes [BR:
amin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AUMI_113820
DNA replication proteins [BR:
amin03032
]
Prokaryotic type
DNA Topoisomerases
AUMI_113820
DNA repair and recombination proteins [BR:
amin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AUMI_113820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAU99924
UniProt:
A0A173LYJ5
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All DBs
Position
sequence1:complement(1426168..1428720)
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AA seq
850 aa
AA seq
DB search
MTSNDNLVTTDENGENRIQQVDLQLEMQRSYLDYAMSVIVGRALPDVRDGLKPVHRRVIY
AMYDGGYRPDKAFSKCARVVGDVMGQFHPHGDSAIYDALVRLVQPWSLRYPLALGQGNFG
SAGNDSAAAPRYTETKMAPLALEMVRDIDEETVDFQDNYDGRTQEPSILPSRFPNLLVNG
SVGIAVGMATNIPPHNLREVAEGALWALANPDATREELLEALIARIKGPDFPTGAQILGV
KGIQDAYRTGRGSITMRAVVNVEELQGRTCLVVTELPYQVNPDNLAIKIAELVKDGKITG
IADIRDETSGRTGQRLVIVLKRDAVAKVVLNNLYKQTQLQENFGANMLAIVDGIPRTLSI
DGFISNWVEHQIDVIVRRTQFRLRKAEERMHILKGYLAALDALDEVIALIRKSPTVEDAR
DGLMSFLKIDELQARAILEMQLRRLAALERQKIIDEATELEAQIKEFNAILASPARQREI
VSEELTDIVARYGDDRRSEIMPGFDGDMNVEDLIPEEEMVITVTRGGYVKRTRSDNYRSQ
HRGGRGVKGAQLRADDVVEHFFVTTTHHWLLFFTNTGRVYRAKAYEVQEAGRDAKGQHIA
NLLALGPDEQVTQILDIRDYQAAKYLALATRDGLIKKTALTEYDTNRTGGIIAIKLREGD
ELVSALLLEEDSDVLLVSRKGMSIRFTATDEALRPMGRSTSGVTGMKFRGGDSLLSASLV
SDSGFVFVVTEGGYAKRTDADQYRTQNRGGLGIKVAKLSEDRGDLVGSLIVGEDDEVLVV
LESGKVVRSAVNEVPAKGRDTMGVVFARFEEGDKILAVARNSERNLDSAEEQNEEEVTSG
DAVVEEAPNE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
ttgacatctaacgacaacctcgtcaccactgacgaaaacggagaaaaccgcatccagcag
gtagacctgcaactggaaatgcagcgttcgtacctggattacgccatgagtgtgatcgtg
ggccgcgcacttcccgacgttcgtgacgggctcaagcctgttcaccgccgtgtgatttac
gcgatgtatgacggtggctaccgtcccgacaaggctttctccaagtgtgctcgtgttgtt
ggtgacgtcatgggtcagttccacccacacggtgactcggctatctatgacgcacttgtt
cgtctggttcagccctggtcgctgcgctacccactggctcttggtcagggaaacttcggt
tccgccggtaacgactctgcagctgcacctcgttacaccgaaaccaagatggctcccttg
gcactggaaatggttcgcgacatcgacgaagaaaccgtcgacttccaggacaactacgac
ggtcgcacccaagagccttcgattctgccttcgcgcttccccaacctgctggtcaacggt
tcggtgggtattgcggtgggtatggccaccaacattcctccccacaacctgcgtgaagta
gccgaaggtgcactgtgggctcttgctaaccccgatgcaacccgtgaagaacttcttgaa
gcgctcattgctcgcattaagggacctgacttccccacgggtgctcagattttgggcgtc
aagggaatccaggatgcttaccgcactggtcgtggatccatcacgatgcgtgccgtggtc
aacgtggaagaactgcagggccgcacctgcttagttgtgaccgaacttccctaccaggtc
aaccccgacaaccttgccatcaagattgctgagcttgtcaaagacggcaagatcactggt
atcgcagatatccgtgatgagacctcgggtcgtaccggtcaacgcctggttattgttctc
aagcgtgatgcggtagcaaaggttgttctcaacaacctctacaagcagacacagttgcag
gaaaactttggcgcgaacatgctcgccatcgtggatggcattcctcgcaccctctctatc
gatggtttcatctccaactgggtagagcaccaaattgatgtcattgttcgccgcacgcag
ttccgtctgcgtaaggcagaagagcgcatgcacatcctcaagggataccttgcagcattg
gatgctctcgatgaagtgattgcactgattcgcaagagccccaccgttgaagatgcgcgt
gatggactgatgtccttcctcaagattgatgagctgcaagctcgcgcaatcttggaaatg
cagcttcgtcgtctggcagctctcgaacgccagaagattatcgatgaagccactgagctc
gaagcacaaatcaaagaattcaacgcaattctggctagcccagcacgtcagcgtgaaatt
gtgtctgaagaactcaccgacatcgttgcccgctacggcgacgaccgccgttcagaaatc
atgcctggtttcgatggcgacatgaacgtagaagaccttattcctgaagaggaaatggtc
atcaccgtgactcgtggtggttacgtcaagcgcacacgcagcgacaactaccgtagtcag
caccgcggcggtcgaggcgtgaagggtgcgcagcttcgcgcagatgacgtcgtagaacac
ttcttcgtgaccacaacccaccactggttgttgttcttcaccaacaccggacgcgtctac
cgcgccaaggcgtacgaagttcaagaagcaggtcgcgacgctaagggtcagcacatcgct
aacttgcttgcactgggaccagatgagcaagtcacgcagattctggacattcgcgactac
caagcagctaagtatttagccttggcaacgcgcgatggtttgatcaagaagacggcgctg
accgaatacgacaccaaccgcaccggtggaatcattgctatcaagctgcgcgaaggagac
gaactcgtctcggcactcctacttgaagaagactccgatgttctactcgtctcgcgcaag
ggtatgagcattcgcttcacagcaaccgatgaggcactgcgccccatgggacgctcaacc
tcgggtgtgaccggtatgaagttccgcggcggagacagcctgttgtctgcctctttggta
tctgactccggattcgtttttgtcgtgaccgaaggtggctacgccaagcgaactgacgca
gaccaataccgcacacaaaaccgtggtggtctaggaatcaaggtagccaagctcagcgaa
gaccgcggagacttggtgggatcactcattgtgggtgaagatgatgaggttcttgtcgtt
cttgaatcgggcaaggttgttcgttccgcagtgaacgaagttcccgccaagggccgcgac
accatgggtgttgtctttgcccgatttgaagaaggcgacaagattcttgccgtggcacgc
aattcagagcgtaatcttgattctgcggaagagcagaacgaagaagaagtaaccagcgga
gacgctgtagtggaagaggcaccaaatgagtag
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