Aurantimicrobium minutum: AUMI_12910
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Entry
AUMI_12910 CDS
T05175
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amin
Aurantimicrobium minutum
Pathway
amin03420
Nucleotide excision repair
amin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AUMI_12910
03430 Mismatch repair
AUMI_12910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amin03400
]
AUMI_12910
Enzymes [BR:
amin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AUMI_12910
DNA repair and recombination proteins [BR:
amin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AUMI_12910
MMR (mismatch excision repair)
Other MMR factors
AUMI_12910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
BAU98833
UniProt:
A0A173LVF6
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All DBs
Position
sequence1:303005..304723
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AA seq
572 aa
AA seq
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MSKNSVSSAEELLTGLDNDQRVVAEELRGPVCVLAGAGTGKTRAITHRIAYGIATGTYSP
DRVLALTFTNRAAGEMRTRLRQLGAGPVQAQTFHAAALRQLGHFWPKFVGGEAPKVFESK
SRPLAEVATKLGLKLDTATLRDLASEVEWRKTSNLSLSSYEKKAYSRAMPGNLAIDDVLA
VMSGYEDLKDSRGQIDMEDVLLLTAGLLETEAAAAMEVRERYRFFVVDEYQDVSPLQHHL
LDLWLGDHRDLCVVGDASQTIYSFTGATSDYLLSFGTRFPDAQVVKLETNYRSTAPIVSV
ANALMRDRPGALTLTAAQQGGSTPTVTAYPNDAAEARAVANKIASEIAAGAQPENIAVLY
RINVQAVALEQALSDLGISTTIHGAQRFYDLPEVKQAILALRGASVSVVGEPLFKSVSDV
LRSVGWSQEAPQTTGAARSKWEALNALMVMADEAPTGTTFRAFTDELLARQAAKHEPTLH
AVTLASVHSAKGLEWDSVHVIGLSEGLFPISYAQNLEAIAEERRLLYVAMTRARKQLSLS
WAQQGTGRATNRERSRFVAELGMHNLGAVNTP
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaactctgtctctagcgctgaagagcttctgacaggccttgataatgatcag
cgcgtcgtcgccgaggagcttcggggtcctgtctgtgttcttgccggtgctggtactgga
aaaactcgcgccattacgcaccgcattgcctatggaatcgcaacgggaacatattcacct
gatcgggttttagctctgaccttcaccaatcgcgccgccggtgaaatgagaacacggttg
cgccaattaggagcaggcccggttcaggcacaaacttttcacgccgcagcactacgtcag
ctgggtcatttctggcctaagtttgttgggggagaagcgcccaaagtttttgaatcaaag
tcgaggccgcttgcagaagtggccaccaaacttgggttgaaacttgatacagcaaccctt
cgagatttggcctctgaagttgaatggcgaaagaccagcaatctcagcctctccagctac
gaaaagaaagcctattctcgagcgatgccaggcaaccttgccatcgacgatgttctcgcg
gtcatgagtggctatgaggatctcaaggactctcgtggacagattgatatggaagatgtg
ctgcttctgacagcaggcttgcttgaaacagaagcggcggctgcgatggaagtgcgcgag
agataccgtttttttgtcgtggatgaatatcaggacgtctcacccttgcaacaccacttg
ctcgatctttggttgggtgatcatcgtgatctgtgcgtggtgggggatgcaagccagacc
atttattccttcaccggtgccaccagtgattacctgttgagctttggcacgagattcccc
gatgcccaggtggtgaagctggaaaccaactatcgatcaactgctcccatagtttctgtg
gcgaacgcgctgatgcgcgatcgcccaggcgctctcacgctcacggcggcacaacaaggc
ggaagcactcccacagtgacggcctatcccaacgatgcggcagaggctcgggctgtggca
aacaagatagcctctgagattgctgctggtgcccaacctgaaaacatcgcagtgttgtat
cgcatcaacgttcaggctgttgctctcgaacaggcgctctctgatctgggaatcagcaca
actattcacggtgctcaacgcttttatgacctacccgaagttaagcaagccattcttgcc
ttacgtggagcatcagtttctgtcgtgggtgagccgctgtttaagtcagtaagcgatgtg
ctgcgttcggtggggtggagtcaagaggctccccaaaccaccggtgcagcacggtcaaag
tgggaggctctcaatgccctcatggtgatggcagatgaagcacccacgggaaccaccttc
cgagctttcaccgatgaacttctcgcccgtcaagcagccaaacatgagcccaccctgcac
gctgtcaccttggcatcagtgcactccgcaaaaggcctggagtgggacagcgttcacgtc
attgggctttcggaaggtctctttccgattagctatgcacaaaaccttgaggccattgct
gaagagcgcagacttctctatgttgcaatgactcgcgctaggaagcagctttcactctcg
tgggctcagcaggggactggccgtgcgacgaaccgagaacgatcacgtttcgtggcagag
cttggcatgcacaatctgggtgcagtaaatactccgtag
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