Aurantimicrobium minutum: AUMI_14930
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Entry
AUMI_14930 CDS
T05175
Name
(GenBank) ribonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
amin
Aurantimicrobium minutum
Brite
KEGG Orthology (KO) [BR:
amin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amin03016
]
AUMI_14930
Enzymes [BR:
amin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AUMI_14930
Transfer RNA biogenesis [BR:
amin03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AUMI_14930
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
TBP-binding
Motif
Other DBs
NCBI-ProteinID:
BAU99035
UniProt:
A0A173LVP1
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All DBs
Position
sequence1:complement(516417..517613)
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AA seq
398 aa
AA seq
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MVRVHVIASPKEFLAACDVISQGTGPIAIDAERASGFTYSQRAYLIQVHRREAGTFLFDP
PAIGDMSELFRHNHTEEWVLHAASQDLACLREVGISPQRIFDTELSARLLGLDRVGLGSV
IEELLGVHLAKEHSAADWSTRPLPEPWLTYAAQDVELLVDLRDEIEKLLIESNKLSWAHE
EFQATLDKPEKIISTEPWRKISGLHTLRSPRQLAVARALWNARDVVAQTKDISPGRLIPD
SSIVAASKRTFSTKGELAACKEFNGRASRSMLDVWWEAVRAGTADENLPVMRIPSDTIPP
PRAWADKRPDALERLNAAKEKLSARAVELSMPTENLLTPSILRELAWAPPSTVTVVSVSA
GLKKLGARPWQIAETCALISNAFVEADQKLNLEPQESS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtggttagggttcacgtcatcgcttcacccaaagaatttctcgccgcgtgcgatgtgatt
tctcagggaactggaccaatcgccatcgatgcggaacgggcatctggattcacctattca
cagcgtgcatatctcatccaagttcatcgacgcgaagcaggaacttttttatttgatcct
ccagctattggtgacatgtcggagttatttcgacacaatcacaccgaagaatgggtcctt
catgcggctagtcaggatctggcgtgtttgagagaagtgggaatttccccgcaacgaatt
tttgataccgaactttctgcccgtttgttgggcttagatcgggtgggcctgggctccgtt
atagaagaattactgggtgtccacctggcaaaagaacatagtgcagcagattggtcaacc
agacctcttcctgaaccttggttgacgtatgcggctcaagatgttgaattacttgttgat
ctcagagatgaaattgaaaaactgctcatcgagtccaacaaactcagttgggctcacgaa
gagtttcaagcaacgcttgataaacctgagaaaataatcagcactgaaccgtggagaaaa
atttcaggtcttcataccctgcgctcccctaggcaacttgctgttgcacgggcgctgtgg
aatgcaagagatgtggttgctcagacaaaagacatctcacccggtcgcctcattccagat
agctcgatcgtggccgcaagcaagcgaactttttccaccaagggtgaacttgcagcgtgt
aaagaattcaatgggcgtgcaagccgcagcatgctcgacgtgtggtgggaggctgtgcgc
gctggcactgctgacgaaaaccttcctgtaatgcgcattccctctgacaccattccaccc
ccacgtgcatgggcggataaacgtcccgatgctttagaacgactaaatgcggcaaaagaa
aaactgagcgcccgagctgtagaactcagtatgcccactgaaaacctcctcactccaagt
attttgcgcgaactagcctgggccccaccttccacagttactgtcgtcagtgttagtgct
ggattgaaaaaattgggcgcacggccctggcagattgctgaaacctgtgcgctaatttct
aatgcttttgtggaagccgaccaaaaacttaacctcgaaccccaagaatcttcgtag
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