Aurantimicrobium minutum: AUMI_15870
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Entry
AUMI_15870 CDS
T05175
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amin
Aurantimicrobium minutum
Pathway
amin03030
DNA replication
amin03430
Mismatch repair
amin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AUMI_15870
03430 Mismatch repair
AUMI_15870
03440 Homologous recombination
AUMI_15870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amin03032
]
AUMI_15870
03400 DNA repair and recombination proteins [BR:
amin03400
]
AUMI_15870
Enzymes [BR:
amin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AUMI_15870
DNA replication proteins [BR:
amin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AUMI_15870
DNA repair and recombination proteins [BR:
amin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AUMI_15870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BAU99129
UniProt:
A0A173LWA0
LinkDB
All DBs
Position
sequence1:complement(619453..622968)
Genome browser
AA seq
1171 aa
AA seq
DB search
MAKNNDSFVHLHVHSEYSMLDGAARVKPLIQAAVDAGMPAIAITDHGNMFGAYDFWNTAT
DAGIKPIIGTEAYLTPGTHRTDKTRVRWNNGGDDDVSGGGAYTHMTLLSASTEGMHNLFK
MSSLASLEGYYFKPRMDRELLNTYGKGLIATTGCPGGEIQTRLRIGQYAEAREAAAEFRD
IFGAENFFVEIMDHGLDIERRVVTDLIKLSKDLGLPLVATNDLHYTHAHDADAHAALLCV
QSGSTLDDPNRFKFESNEFYLKSAAEMRRLFADYPEACDNTLLIAERCETSFEKRDLMPR
FPVPEGETEASWFAKEVAAGLEKRFPQGVPEAHQAQAKYEVDVIIQMGFPGYFLVVADFI
AWARKQGIRVGPGRGSAAGSLASYAMGITELDPLHHGLIFERFLNPERVSMPDVDVDFDD
RRRGEVIKYVTEKYGDDRVAQIVTYGTIKAKQALKDSARVLGMPYSVGEKLTKAMPPSIM
GKDISLTEIMDPQSARYKEANDFRSVLESDVDAQTVFNTAQGIENLKRQWGVHAAGVIMS
AEPLMDVIPIMKREDDGAIITQFDQPPCESLGLLKMDFLGLRNLTVIQDALVNIKNNRGI
TVEPETLDLDADPATYELLSRGDTLGVFQLDGGPMRALLRQLKPTNFEDISAVIALYRPG
PMGMNSHTNYALRKNGLQEIEPIHPELEEPLSEILGTTYGLIVYQEQVMAVAQKVAGFTL
GQADVLRRAMGKKKKSELDKQFADFEAGMISNGYSPSAVKILWDTLMPFADYAFNKAHSA
GYGVLSYWTAYLKANFPAEYMAALLTSVGDSKDKLGMYLSECRRMGLNVLAPDVNESDGV
FSAVGTDIRFGMGAIRNVGFGVVEHIKAARLEKGRFDSFHDFLKKVPLPVANKKTLESLI
KAGAFDAMGNTRRALVEIHEDAVESAVSLKRNEANGQVDLFGDMFEFEQDHTQVPDRPEF
TKRDKLAFEREMLGLYVSDHPLAGLELQLAKHATITINELTTNDQTNDGDIVVLAGLVTE
VQRRIAKKSGNAYGIIKLEDFGGELDIMLLGRTYQEFGPMLETDMVLAVKGRVNVRDDGV
NIQAMSMFVPDLGSNITNNAPLNLVLPEIRATSSTVSELSEVLKRHPGESEVRLKLTRGD
VARVFELPARVNVNSDLFGELKSLLGPGCLG
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaacaacgactcgttcgttcatctccacgtacattctgaatactccatgctt
gatggcgctgctcgcgtcaaaccacttatccaggcagctgttgatgctggtatgccggca
attgcgattaccgaccatggaaacatgtttggggcctacgacttctggaacaccgcgacc
gatgccggaattaagcccatcattggtacagaggcttacctcactccgggaacgcaccgt
acagacaaaactcgtgttcgttggaacaacgggggagatgatgacgtctccggtggtggc
gcttatacccacatgacgctcctatcggcatcgacggagggtatgcataacctcttcaag
atgtcgtctcttgcgtcgctagagggctattacttcaagcctcgcatggacagagaacta
ctcaatacctacggcaaaggattgattgcgacaacaggatgcccaggtggtgaaatacaa
acccgtttgcgtataggccaatacgcagaagctcgtgaagcagcagctgagttccgagac
attttcggagctgagaatttctttgttgaaattatggatcatgggttagatattgagcga
cgggtagttactgatctgatcaagctctccaaagacttgggattgcctcttgtagcaacg
aatgatcttcattacacgcatgcacacgatgcagacgcgcatgctgcattgttatgtgtt
cagtcgggctctactcttgatgacccaaacagatttaaattcgaatctaacgagttctat
cttaaatctgcagcagaaatgcgtcgactctttgccgattaccccgaggcatgcgacaac
actctcctcatcgcagaacgttgcgaaaccagtttcgaaaagcgtgacctcatgccgcgt
tttcctgtgcctgaaggagaaactgaggccagctggtttgcgaaagaagtagctgccggg
ttggaaaaaaggttccctcagggcgttcctgaagcacatcaagctcaagctaagtatgaa
gttgatgtcattattcaaatgggtttccccggctacttcctagttgttgcggatttcatt
gcatgggcacgaaagcaaggcattcgtgttggaccgggccgcggttcggcagcaggttca
ctcgcttcttatgccatgggaattactgaactggaccctctgcatcacggtcttattttt
gagcgtttcctcaaccctgagcgtgtttctatgccggatgttgacgttgactttgatgat
cgtcgccgcggtgaggtcatcaaatacgtcaccgaaaaatatggtgatgatcgtgttgca
caaatcgtgacctatggcacaatcaaggcaaaacaagcactgaaagactctgcccgtgta
cttggtatgccatattcggtcggtgaaaaactgacaaaggcaatgccgccctcgattatg
ggcaaagatatctcccttaccgagatcatggatccccagtcagcgcgatataaagaagca
aatgatttccgctcagtcttggaatctgatgttgatgcgcaaacagtgttcaacacagct
cagggaattgaaaatctcaaacgccaatggggtgttcacgctgctggtgtgatcatgtcg
gctgaaccgctgatggatgttatccccatcatgaaacgcgaagatgatggagcaatcatc
acccagtttgaccagcccccttgtgagtctttggggctactcaaaatggacttcttgggt
cttcgtaacctcacggttattcaggatgctttggtcaatatcaagaacaaccgtggaatt
accgtagaacctgaaacacttgacctagatgcagaccctgcaacgtacgaactcctctct
cgaggggacacacttggagttttccagctcgatggcggtcccatgcgtgcactattgagg
caattgaaaccaacaaacttcgaagatatttccgcggttattgccctttaccgaccaggt
ccaatgggaatgaattcgcatacaaactatgcgcttcgcaaaaatggtctgcaagaaatt
gagcccattcatcctgagcttgaagaaccactttctgagattctgggaacaacatacggc
ctcattgtctatcaagagcaagtgatggctgtcgcgcaaaaagtcgcaggcttcacacta
gggcaagcagatgttttgcgtcgcgccatgggaaagaagaagaagtcggaactggataag
cagtttgccgatttcgaagcgggaatgatttccaacggatattcgcccagtgccgtcaag
attctctgggataccctcatgccattcgctgactacgccttcaacaaggctcattctgca
gggtatggcgttttgagttattggaccgcgtatctcaaggcaaatttcccagcagagtac
atggctgcactgttgacttctgtgggtgattccaaggacaaacttggtatgtatctctct
gaatgtcgacgtatgggtctgaacgtcctcgctcccgacgtcaacgaatctgatggtgtc
ttttcggcagttggaacagatatccgttttggcatgggtgccatacgtaacgtgggattt
ggagtcgttgaacatatcaaagcagcacgcttggaaaaaggaagattcgattcatttcat
gacttcttgaagaaagttccacttccagtagcaaataaaaagacgttggaatcactgatc
aaagccggtgcttttgacgctatgggtaatacccgaagagcactggtcgaaattcatgaa
gacgcggtcgaatcagcagtcagcctgaagcgtaacgaggcaaacgggcaagttgacctt
ttcggcgacatgtttgaatttgagcaggatcacactcaagttcctgatcgtcccgaattc
acaaagcgtgacaaactcgcctttgaacgtgaaatgttgggtctttacgtatctgatcac
cctttggcagggctagaactccaattggcgaaacacgccactatcaccatcaatgagctc
actacgaacgatcaaacaaatgatggcgacattgttgttctggctggactggtgacagaa
gttcaacggcgcattgctaaaaagtcaggaaacgcatacggaataatcaagctcgaagat
ttcgggggagagcttgacataatgctgctggggcgcacgtatcaagaatttggccccatg
ctcgaaactgacatggtgcttgcagtcaagggtcgagttaatgttcgtgatgacggtgtc
aacatccaagctatgagcatgtttgttccagatctcggatcaaacatcacgaacaatgca
ccgctaaatcttgtgcttccggaaatcagagcaacatcttcgacagtgtcagagctatca
gaagtactcaaaagacacccaggtgaatcagaagttcgactcaagctcacacgaggagat
gttgcccgtgttttcgaattgccagcacgagtgaacgtgaattctgatttattcggtgaa
ctcaagtcacttctcggtcctggctgtctcgggtag
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