Aminobacter sp. NyZ550: N7E70_001490
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Entry
N7E70_001490 CDS
T11159
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amio Aminobacter sp. NyZ550
Pathway
amio03030
DNA replication
amio03410
Base excision repair
amio03420
Nucleotide excision repair
amio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N7E70_001490 (polA)
03410 Base excision repair
N7E70_001490 (polA)
03420 Nucleotide excision repair
N7E70_001490 (polA)
03440 Homologous recombination
N7E70_001490 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amio03032
]
N7E70_001490 (polA)
03400 DNA repair and recombination proteins [BR:
amio03400
]
N7E70_001490 (polA)
Enzymes [BR:
amio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N7E70_001490 (polA)
DNA replication proteins [BR:
amio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
N7E70_001490 (polA)
DNA repair and recombination proteins [BR:
amio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
N7E70_001490 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N7E70_001490 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_polI_exo1
HHH_2
Taq-exonuc
HHH
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
WAX95589
LinkDB
All DBs
Position
289416..292397
Genome browser
AA seq
993 aa
AA seq
DB search
MKKGDHLFLVDGSGYIFRAYHALPPLTRKSDGLPVGAVSGFCNMLWKLMLDARNTEAGVV
PTHFAVIFDYSSKTFRNELYPEYKANRSAPPEDLIPQFGLIRQATKAFDLPCIEMEGFEA
DDLIATYARLACEAGGDTTIVSSDKDLMQLVGPSVSMYDPMKDRQINIPEVIEKWGVPPE
KMIDLQALTGDSVDNVPGVPGIGPKTAAQLLEQFGDLDTLLARASEIKQDKRRQSIIDNT
EKARISRELVRLKIDVPVTDGLEDFVLQPPNGPKLIGFLKTMEFTSLTRRVAEATGTEAG
EIEAVPVSVQWGADAHGPDVGAGATPAAAPAAGPAARANGGSISAAVPPSAPADGGTALD
TPTDLANKIAAAAVSEKFDHAAYVTIRDLATLKAWVAEATEAGVMAFDTETSSLDPMQAE
LVGISFATAPGRAAYVPLAHKSGRGDLLGGGLVENQIPVRDALATLKPLLEDGSVLKIAQ
NLKYDLVVMNRHGVDISPFDDTMLLSYVLDGGTNGGHGMDPLSEKWLGHTPIAFKDIAGS
GKNFVGFDQVDIDKATAYAAEDADVTLRLWRVLKPRLAAKGLTSVYERLERPLVPVLAEM
EQRGISVDRQILSRLSGELAQGAARLEDEINTLAGERFNIGSPKQLGDILFGRMGLPGGT
KTKTGQWSTSAQVLEDLAAEGHELPRKIVDWRQLTKLKSTYTDALPGFINPETKRVHTSY
ALAATTTGRLSSSDPNLQNIPIRTAEGRKIRTAFIADKGNKLISADYSQIELRVLAHVAD
IAQLKQAFADGVDIHAMTASEMFSVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLSI
PREEASDYIKKYFERFPGIRAYMDETKAFCRDNGYVETIFGRRIHYPEIRSSNPSVRAFN
ERASINARLQGTAADIIRRAMIRMDDALIAAKLSARMLLQVHDELIFETVENEVAATIPV
VRHVMENAAMPAASMSVPLHVDANAADSWDEAH
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctagtcgacggctccggctacatcttccgcgcctat
cacgcgctgccgccgctgacccgtaagtcagacggcctgccggtcggcgcggtgtccggt
ttctgcaacatgttgtggaagctgatgctcgacgcgcgcaacaccgaagccggcgtggtg
ccgacccatttcgccgtcatcttcgactattcgtccaagaccttccgcaacgagctctat
cctgaatacaaggccaaccgctcggcgccgccagaagacctgatcccgcaattcggcctg
atccgccaggcgacaaaagctttcgacctgccctgcatcgagatggagggcttcgaggcc
gacgacctgatcgcaacctacgccaggctcgcctgcgaggcaggcggcgacaccaccatc
gtctcgtccgacaaggacctgatgcagctcgtcggtcccagcgtgtcgatgtacgacccg
atgaaggatcggcagatcaacattcccgaggtcatcgagaagtggggcgtgccaccggag
aagatgatcgacctgcaggcgctgaccggcgactcggtcgacaacgtgccgggcgttccc
ggcatcggcccaaagacggcagcacaattgctcgaacagttcggcgacctcgacacgctt
ctcgcccgcgcctccgagatcaagcaagacaagcgccgccagtcgatcatcgacaacacc
gaaaaggcgcgcatttcgcgcgagctggtgcggctcaagatcgatgtgccggtgaccgac
gggctcgaagatttcgtgctgcagccgcccaacgggccgaagctgatcggcttcctcaag
acgatggaattcacgtcgctgacgcgccgcgtcgcggaggccacgggcaccgaggcgggc
gagatcgaggccgtgccggtatcagtgcaatggggcgccgacgcgcatggaccggacgtc
ggagcgggcgcaacacctgcagcggcacccgccgcaggtcccgccgcgcgtgcgaacggc
ggcagcatctctgccgcagtgcccccgtccgcccctgccgacggcggcaccgcgctcgac
acgcctaccgacctcgccaacaagatcgctgcagccgcagtctcggaaaaattcgaccac
gccgcctatgtcacgatccgtgacctcgcgacactgaaggcctgggtggccgaggcgacc
gaggccggcgtcatggcattcgacaccgagaccagctcgctcgatccgatgcaggccgag
ctcgtcggcatttctttcgccaccgcaccgggacgcgccgcctatgtgccgctcgcccat
aagagcggacgcggcgacctgctcggcggtggcctggtcgagaaccagattccggtgcgc
gacgccctagccaccctcaagccgctactcgaagacggttcggtgctgaagatcgcgcag
aacctgaaatacgacctggtggtgatgaaccgccacggcgtcgacatcagtccgttcgac
gacacgatgctgttgtcctacgtgctcgacggcggcaccaatggcggccacggcatggac
ccgctgtcggaaaaatggctcggccacacgccgatcgccttcaaggacatcgccggctcg
ggaaagaacttcgtcggcttcgaccaggtcgacatcgacaaggcgaccgcctatgccgcc
gaggatgccgacgtgacactgcgcttgtggcgcgtgctgaagccacgcctcgccgccaag
gggctgacctcggtctacgagcggctggagcgcccgctggtgccggtgttggccgagatg
gagcagcgcggcatctcggtcgacaggcagatcctgtcgcggctgtcgggcgagctcgcc
cagggtgccgcgcggcttgaagacgagatcaacacgcttgccggcgagcgcttcaacatc
ggatcgcccaagcagctcggcgacatcctgttcggccgcatgggcctgcccggcggcacc
aagaccaagaccggccagtggtcgacctcggcgcaggtgctcgaggatctcgccgccgaa
ggccacgagctgccgcgcaagatcgttgactggcgccagctgaccaagctgaaatcgacc
tataccgacgccctgcccggtttcatcaaccccgagaccaaacgcgtccacacctcctac
gcgctggccgccactaccaccggccggctgtcgtcgtcggatcctaacctgcagaacatt
ccgatccgcaccgccgaaggccgcaagatccgcaccgccttcatcgccgacaagggcaac
aagctgatctcggccgactacagccagatcgagctgcgcgtgcttgcccatgtcgccgac
attgcccagctcaagcaggctttcgccgacggcgtcgacatccatgccatgacggcatcg
gaaatgttctcggtgccggtcgagggtatgccgtcggaagtgcgccgccgcgccaaggca
atcaacttcggcatcatctacggcatctcggccttcggcctcgccaatcagctgtcgatc
ccgcgcgaggaagcgtccgactacatcaagaagtatttcgagcgcttccccggcatccgc
gcctatatggacgagaccaaggcgttctgccgtgacaacggctatgtcgagaccatcttc
ggccgccgcatccactatcccgaaatccgctcgtcgaacccgtcggtacgcgccttcaat
gaacgcgcctcgatcaacgcccgcctgcaaggcaccgcagccgacatcatccgccgggcg
atgatccgcatggacgacgcactgatcgcggccaagctgtcggcgcgcatgctgctgcag
gtgcacgatgaactgatcttcgaaactgtcgagaatgaggtcgcagcgacgatccctgta
gttcggcacgtgatggagaacgcggccatgccggccgcgtcgatgtcggtgccgctgcat
gtcgacgccaacgccgccgacagctgggacgaagcgcactga
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