Aminobacter sp. NyZ550: N7E70_003800
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Entry
N7E70_003800 CDS
T11159
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
amio Aminobacter sp. NyZ550
Pathway
amio03030
DNA replication
amio03430
Mismatch repair
amio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N7E70_003800 (holA)
03430 Mismatch repair
N7E70_003800 (holA)
03440 Homologous recombination
N7E70_003800 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amio03032
]
N7E70_003800 (holA)
03400 DNA repair and recombination proteins [BR:
amio03400
]
N7E70_003800 (holA)
Enzymes [BR:
amio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N7E70_003800 (holA)
DNA replication proteins [BR:
amio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N7E70_003800 (holA)
DNA repair and recombination proteins [BR:
amio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N7E70_003800 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
Phage_T4_Y06R
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
WAX96012
LinkDB
All DBs
Position
complement(778714..779763)
Genome browser
AA seq
349 aa
AA seq
DB search
MAQKKAHEVDSWLARPAAEAVIVLIYGPDRGLVSERASAFAAKTGLPLDDPFSVVKIDAA
DVERDSGRLVDEARTVPMFSPRRLIWVRNAAAQKSLADDVKALAADPPRDAVILIEAQDL
KKGAPLRTIVEGAFAGMALPCYADEARDIESVIDEELRTAGLNMAMDARNALRRSLGGDR
LATRGEIQKLTLYAMGKGEISLEDVKDMTGDVSALSLDDAIDAALGGNIAEFDAAFTKQC
QTGSQAAQLLATATRHLQNIHLMRGEMENGGRNASAVVAAARPPVFFSRRRAVEKTLSSW
SAAALTRALTRLQSTTLQTRRRPDLAVALARQAMLGIAVEGARLSSGRR
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaagaaagctcacgaagtcgattcctggctggctcggcccgctgccgaagcc
gtcatcgtgttgatctacggccccgaccggggcctcgtttctgagcgcgcttcagccttt
gccgccaagaccggcctgccgctcgatgatcccttctccgtcgtcaagattgacgccgcc
gatgtcgagcgcgacagcggccgtctcgtcgatgaggcccgcaccgtgccgatgttttcg
ccgcgccggctgatctgggtgcgcaacgccgctgcccagaagagccttgccgacgacgtc
aaggcgctggccgccgacccgccgcgcgacgccgtcatcctgatcgaggcgcaggatctc
aagaaaggcgcgccgttgcgcacgatcgtcgaaggcgcctttgccggcatggccctgccc
tgctacgccgacgaggcgcgcgatatcgaaagcgtcatcgacgaggaactgcgcaccgcc
ggcctgaacatggccatggacgcccgcaacgcactgcgccgcagcctcggcggcgaccgc
cttgcgacacgcggcgagatccagaagctgacactctatgccatgggcaagggcgagatc
tcgctcgaagacgtcaaggacatgactggcgatgtctcggcattgtcgctggacgacgcc
atcgacgcagcccttggcggcaacatcgccgagttcgacgccgctttcaccaagcagtgc
cagaccggaagccaggcggcacagcttctcgcgaccgcaacccgccacctccagaacatt
catctgatgcgcggcgagatggaaaatggcggccgcaacgcctcggcggtcgtcgccgcg
gcacgccccccggtgttcttctcccgccgccgggccgtggaaaaaaccttatcgagctgg
agcgcggcagcgctgacccgcgcattgacacggctgcaatcgacaacgctgcagacccgt
cgccgccccgaccttgcggttgcgctggcgcgccaggcgatgctcggcattgccgtcgaa
ggcgcccgcctgtcgtccggtcgacgctaa
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