Aminobacter sp. NyZ550: N7E70_003935
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Entry
N7E70_003935 CDS
T11159
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
amio Aminobacter sp. NyZ550
Pathway
amio02024
Quorum sensing
amio03060
Protein export
amio03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
amio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
N7E70_003935 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
N7E70_003935 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N7E70_003935 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
amio02044
]
N7E70_003935 (ffh)
Enzymes [BR:
amio01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
N7E70_003935 (ffh)
Secretion system [BR:
amio02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
N7E70_003935 (ffh)
Eukaryotic Sec-SRP protein
N7E70_003935 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_33
Zeta_toxin
AAA_30
AAA_31
AAA_22
AAA_19
ATPase
ArsA_ATPase
6PF2K
ResIII
DnaB_C
TctA
APS_kinase
ABC_tran
AAA_25
AAA_17
AAA_14
AAA_18
Thymidylate_kin
AAA
AAA_16
KTI12
AAA_28
AAA_5
NACHT
NPHP3_N
DNA_ligase_OB_2
Motif
Other DBs
NCBI-ProteinID:
WAX96038
LinkDB
All DBs
Position
810586..812169
Genome browser
AA seq
527 aa
AA seq
DB search
MFESLQERLGSILNGLTGRGALSEADVSAALREVRRALLEADVALEVVRSFTDKVREKAV
GAAVLKSIKPGQMVVKIVHDELVEMLGAEGVAVDLNAPAPVVIMMVGLQGSGKTTTSAKI
AKRLTERQGKKVLMASLDTRRPAAQEQLRQLGEQTKVATLPVIAGQSPVDIAKRAVQAAK
LGGHDVVILDTAGRTHIDEPLMVEMADIRKVSDPHEILLVADSLTGQDAVNLAKNFDDRV
GITGLVLTRMDGDGRGGAALSMRAVTGKPIKLIGVGEKMDALEEFYPKRIADRILGMGDI
VSLVEKAAETIDAEKAAAMAKKMQSGKFDLNDLADQLGQMQKMGGMGGIMGMMPGMGKMK
DQMAAAGLDDKMFGRQLAIISSMTKAERANPDVLKHSRKKRIAAGSGTDAAEINKLLKMH
RQMADMMKAMGGKGKGGGLMRGMMGGLASKMGLGGMMPGGGMPDLSKMDPKQLEALQKQA
EAAGLGGGLKGLPGGMPGLGGGGLPGLPGGMKLPGLGGGLPGLGKKK
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaatcgctgcaagagcggcttggatcgatccttaacggcctgaccggccgtggc
gcactgtcggaggccgatgtctcggcagccctgcgcgaggttcgccgtgccctgctcgaa
gccgacgtggcgctggaagtcgtccgctcgttcaccgacaaggtgcgcgagaaggccgtc
ggcgccgccgtcctgaagtcgatcaaacccgggcagatggtcgtcaagatcgtccatgac
gaacttgtcgaaatgcttggcgccgaaggcgtagccgtcgacctcaacgcgcccgctccg
gtcgtcatcatgatggtcggcctgcagggttcgggcaagaccaccacctcggccaagatc
gccaagcgcctcaccgagcgccagggcaagaaggtcctgatggcctcgctcgacacgcgc
cgcccggccgcgcaggagcagctgcgccagctcggcgagcagaccaaggtcgcgaccctt
cccgtcatcgccggccagtcgccggtcgacatcgccaagcgcgccgttcaggcggccaag
ctcggcggccacgacgtcgtcatcctcgacacggccggccgcacccatatcgacgagccg
ctgatggtcgagatggccgacatccgcaaggtgtcggacccgcacgaaatcctgctcgtc
gccgactcgctgaccggccaggatgccgtcaacctcgccaagaatttcgacgaccgcgtc
ggcatcaccggcctggtgctgacccgtatggacggcgacggccgcggcggtgctgcgctg
tcgatgcgcgctgtcaccggcaagccgatcaagctgatcggcgtcggcgaaaagatggat
gcgctggaggagttctatcccaagcgcatcgccgaccgcatcctcggcatgggcgacatc
gtttcgctggtcgagaaggctgccgaaaccatcgacgcggaaaaagccgcggcgatggcc
aagaagatgcagtcgggcaagttcgacctgaacgacctcgccgaccagcttggccagatg
cagaagatgggcggcatgggtggcatcatgggcatgatgccgggcatgggcaagatgaag
gaccagatggccgcggcgggcctggacgacaagatgttcggccgccagcttgccatcatc
tcgtcgatgaccaaggccgagcgtgcgaaccccgacgttctcaagcactcgcgcaagaag
cgcattgctgccggttccggcaccgacgccgccgagatcaacaagctgctcaagatgcat
cgccagatggccgacatgatgaaggccatgggcggcaagggcaaaggcggcggcctcatg
cgcggcatgatgggcggcctggcttccaagatgggcctcggcggcatgatgcctggcggc
ggcatgcccgacctgtccaagatggatcccaagcagctcgaagccctgcagaagcaggcc
gaagccgcaggcctcggtggcgggctcaagggtcttccgggcggcatgcctggtctcggc
ggcggtggccttcccggcctgcccggcggcatgaagcttcccggtctcggtggtggcctg
cctggccttggcaagaagaagtga
DBGET
integrated database retrieval system
