Aminobacter sp. NyZ550: N7E70_004530
Help
Entry
N7E70_004530 CDS
T11159
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
amio Aminobacter sp. NyZ550
Pathway
amio00300
Lysine biosynthesis
amio00470
D-Amino acid metabolism
amio01100
Metabolic pathways
amio01110
Biosynthesis of secondary metabolites
amio01120
Microbial metabolism in diverse environments
amio01230
Biosynthesis of amino acids
Module
amio_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amio00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N7E70_004530 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N7E70_004530 (dapF)
Enzymes [BR:
amio01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
N7E70_004530 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PmbA_TldD_2nd
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WAX96150
LinkDB
All DBs
Position
925401..926285
Genome browser
AA seq
294 aa
AA seq
DB search
MAIEAPFAKMNGLGNDIIVADMRGRADRVTPAAAIALAADPATKFDQIMAIHDPRTPGTV
NYIEIINSDGTHAQACGNGTRCVVQALAAETGQKVFTFETVAGILNAEEHEDGSISVDMG
IPRFGWQDIPLAEEFRDTRAIELQIGPIDQPVLHSPSVASMGNPHAIFWVDNDVWSYDLD
RFGPLLENHPIFPERANISIAQVTSPGTLNLRTWERGAGLTLACGSATCAAAVSAARTGR
TGRSVTVTVPSGGTLQIDWRNDDHVVMTGPAEWEFSGSFNPATGAWRRDQQDVA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggccattgaggcccctttcgccaagatgaacgggctcggcaacgacattatcgttgcc
gacatgcgcggtcgcgcggaccgcgttacgcctgccgcggcgattgcgcttgccgccgat
ccggcgaccaagttcgaccagatcatggcgatccacgacccgcgcaccccgggcaccgtg
aactacatcgagatcatcaactccgacggcacccatgcccaggcctgcggcaatggcacg
cgctgcgtcgtccaggcgctggccgccgagaccggacagaaggtgttcaccttcgagact
gttgccggcatcctcaatgccgaagagcatgaggacggctcgatctcggtcgacatgggc
attccccgcttcggctggcaggacatcccgctggcggaagaattccgcgacacccgcgcc
atcgagttgcagatcgggccgattgaccagcctgtgctgcattcgccctcggtcgcctcg
atgggcaacccgcacgccattttctgggtcgacaacgacgtctggtcctacgatctcgac
cgtttcggcccgctgctcgaaaaccatccgatctttcccgagcgtgccaacatctcgatc
gcccaggtgacctcgcccgggacgctcaacctgcgcacctgggagcgtggcgccggcctg
accttggcttgcggttcggccacctgtgctgctgccgtctcagccgcgcgcaccggccgt
accggccgtagcgtgaccgtcaccgtgccgagcggcggtacgcttcagatcgactggcgc
aacgacgaccatgtcgtcatgaccggtcccgccgagtgggaattctccggcagcttcaat
ccggcgaccggcgcctggcgtcgcgatcagcaggacgtcgcctga
DBGET
integrated database retrieval system