KEGG   Aminobacter sp. NyZ550: N7E70_015520
Entry
N7E70_015520      CDS       T11159                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
amio  Aminobacter sp. NyZ550
Pathway
amio02020  Two-component system
Brite
KEGG Orthology (KO) [BR:amio00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    N7E70_015520
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:amio02022]
    N7E70_015520
Two-component system [BR:amio02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   N7E70_015520
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 HTH_8 AAA_5 HTH_50 AAA_16 AAA_2 Tnp_IS2_N FD_BcsB_1st AAA HTH_28
Other DBs
NCBI-ProteinID: WAX93107
LinkDB
Position
complement(3149652..3151007)
AA seq 451 aa
MKPPVVLLVDDEDELRRSTAQSLDLAGLAVQDSPSGERALDFITQGFNGVVVSDIRMPGM
DGMTLMGRIHEVDPDIPVILVTGHGDVQLAVRAMREGAYDFIEKPFTSQHIAEMAARAID
RRKLVLENRELRAAAGKNDDLEARLPGRSNIMVELRYKLRAIAGTDADALIIGDTGTGKE
VAAHALHDISSRATKPFVAINCAALPETLIESELFGHEAGAFPGALRPRYGKFEHARGGT
VLLDEIGSMPADLQAKLLRVIQDRIIFRLGSNEPIPLDVRFIATSKADLDAEVAAGRFRA
DLLYRLNVVTLRMPALTARREDVPLLFLQLVREATGRYRREAMEVPPRIVADIARRDWPG
NVRELRNAADRFVLGLGLQSTEEGSSDGDERLAERVAGFEKNVIQAALVAHGGSLKPVYE
QLGISRKTLYEKMQRYGLDKNQVGMADASEQ
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgaagccgccggtcgtgcttctggtcgacgacgaggacgagctgcgccgatcgaccgcg
cagtcgctcgacctcgccggcctcgccgtccaggacagccccagcggcgagcgcgccctc
gacttcatcacccagggcttcaacggcgtcgtcgtctcggacatccgcatgcccggaatg
gacggcatgacgctgatgggacgcatccacgaggtcgaccccgacattcccgtcatcctg
gtcaccggccatggcgacgtccagcttgccgtgcgcgccatgcgcgagggcgcctacgac
ttcatcgagaaacccttcacctcccagcacattgccgaaatggctgcgcgcgccatcgac
cggcgcaagctcgtactcgagaaccgggagctgcgcgccgcagctggcaagaacgacgac
ctcgaggcccgcctgcccggacgcagcaacatcatggtcgagttgcgctacaagctgcgc
gccattgccggaaccgatgccgacgcgctgatcatcggcgacaccggcaccggcaaggaa
gtggcggctcatgcgctgcacgacatcagcagccgcgccaccaaacccttcgtcgccatc
aattgtgccgccctgcccgaaaccctgatcgagagcgagctgttcggtcacgaggccggc
gccttccccggcgcgctgcgcccacgctacggcaagttcgagcatgcccgtggcggcacg
gtgcttctcgacgagatcggctcgatgccggcagacctgcaggccaagctgttgcgcgtc
atccaggaccgcatcatctttcgcctcggctccaatgagccgataccgctcgacgtgcgc
ttcatcgccaccagcaaggccgacctcgacgccgaggttgctgccggacgcttccgcgcc
gacctgctctaccggctcaacgtcgtgaccttgcgcatgcccgcgctcacggcgcgccgc
gaggacgtgccgctgcttttcctgcagctggtgcgcgaagcaaccgggcgctaccgccgc
gaggcgatggaggtgccgccccgcatcgtcgccgacatcgcccggcgcgactggcccggc
aatgtgcgcgaattgcgcaacgccgctgaccgtttcgtgctcggcctcgggctgcagtcc
accgaagagggctccagcgacggtgacgagcgcctggccgagcgcgtcgccggcttcgag
aagaacgtcatccaggccgccctcgtcgctcatggcggcagcctcaagccggtctacgag
cagctcggcatctcgcgcaagacgctctacgagaagatgcagcgctacggtctcgacaag
aatcaggtcggcatggcggatgcctccgagcagtag

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