Aminobacter sp. NyZ550: N7E70_016605
Help
Entry
N7E70_016605 CDS
T11159
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amio Aminobacter sp. NyZ550
Pathway
amio03030
DNA replication
amio03430
Mismatch repair
amio03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amio00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N7E70_016605 (dnaE)
03430 Mismatch repair
N7E70_016605 (dnaE)
03440 Homologous recombination
N7E70_016605 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amio03032
]
N7E70_016605 (dnaE)
03400 DNA repair and recombination proteins [BR:
amio03400
]
N7E70_016605 (dnaE)
Enzymes [BR:
amio01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N7E70_016605 (dnaE)
DNA replication proteins [BR:
amio03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N7E70_016605 (dnaE)
DNA repair and recombination proteins [BR:
amio03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N7E70_016605 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
WAX93311
LinkDB
All DBs
Position
3344042..3347491
Genome browser
AA seq
1149 aa
AA seq
DB search
MFIHLRVHSAYSLLEGALKLDKVVGHAAKDEAPAIAVADTNNLFGALEFAQKATKDGVQP
LIACQVDVDFADGGDSTQRGQGWKQALDLFPVVLIAATETGYANLVRLVSRLYLETPNGE
PVHAKLDWLATAADGIICLTGGPRGPVGAAIKSDHTAIAESRLLTLKQMFGDRLYVELER
LAGYDRMIEAATIELAYRHYLPLVATNEAFFAKRADFEAHDALIAIAEGSVVAEDNRRRL
TPDNFLKSQKEMAELFADLPEAIDNTVEIARRCSYYPKNRNPILPRFTGGDIADADAAVA
AEAAELSRQAREGLAMRLETRGLSTGYTPEQYQERLEYELGIIERMKFPGYFLIVADFIK
WGKQQGIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPDRVSMPDFDIDFCQD
RREEVIRYVVGKYGRDQVGQIITFGTLQARAVLRDVGRVLQMPYGQVDKLTKMVPQNPAN
PVTLAQAIEGEPRFAEEAEREPIVQTLLDMAQKLEGLYRHASTHAAGIVIGDRPLSELVP
MYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKTLTVLQKAVHFISRKGVDIDLALIPLD
DPLTYAMLSRGETVGIFQVESAGMRKALIGMKPDQVEDIIALVALYRPGPMENIPTYNAR
KHGDEEIASIHPMIDYLVKETQGVIVYQEQVMQIAQVLSGYSLGEADLLRRAMGKKIRAE
MDKQRERFVTGAMEKKVSKPQANAIFDLLAKFADYGFNKSHAAAYAIVSYQTAYLKAHYP
VEFLAASMTYDMSNTDKLNDFRQDAMRLGIDVVPPSVMTSFRDFEVGEKKIFYSLAAIKG
VGEAAVHHIVAKRQEKPFASLADFCERIDPKLVGKRVFESLIMAGALDCFGHERAAMMAG
IERMMGLASRAHENATLGQSDIFGSAASGQAPSLHLPVADAWLAADRLHREFQVVGFYLS
AHPLDEYKAALEKMRVQNWADFAAAVKRGATAGRLAGTVTTKQERKTKTGNKMGIVQFSD
VSGQYEAVMFSETLAQYRDLCEPGKSVVVTVAAEDRPEGVNLRIQTVQSLEDEASRVQKT
LRIFVRDAAPLNMLSNQLTVRGEGEVSFIVLKGEAEGEIEIELRERYRITPSIASAMRAV
PGVVEVELV
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgttcattcatctgcgcgttcattctgcctattcgctgctcgaaggtgccctgaagctc
gacaaggtcgtcggacacgctgccaaggacgaggcgcccgccatcgcggttgccgacacc
aacaacctgttcggcgcgctggagtttgcccaaaaggccaccaaggatggtgtgcagcca
ttgatcgcttgccaggtcgacgttgactttgcagacggtggcgacagcacccaacgcggc
cagggctggaagcaggcactcgatctgtttccggtggttctgattgccgcgaccgagacc
ggctacgccaaccttgtcaggctggtcagccggctctatctcgaaaccccgaacggcgaa
ccggtgcacgccaagctcgattggctcgccaccgcagcggacggtattatctgcctgacc
ggtggcccacgcgggccggtcggtgccgcgatcaagagcgaccacacggcaattgccgaa
agccgcctgctgaccctgaagcagatgttcggcgatcggctttacgtcgaactcgagcgt
ctggccggctatgaccgcatgatcgaggcggcaacgatcgaactcgcctatcgccactat
ctgccgctggtcgccaccaatgaggcgttcttcgccaagcgtgccgacttcgaggcccat
gacgcgctcattgccatcgccgagggttcggtcgtcgccgaggacaatcgccgcaggctg
acgccggacaatttcctcaagtcgcagaaggagatggcagagctttttgctgatctgcct
gaggcgatcgacaacaccgtcgagatcgccaggcgctgttcctactatcccaagaaccgc
aatccgatcctgccgcgattcaccggtggcgacatcgccgatgccgacgcggcggttgcc
gccgaagcggcggaactgtcccgccaggctcgcgaaggtcttgcgatgcgcctggaaacg
cgtggcctgtcgaccggctacacgcccgaacagtaccaggaacggctcgaatatgagctt
ggcatcatcgagcgaatgaaattcccgggctacttcctgatcgttgccgacttcatcaaa
tggggcaagcaacagggcatcccggttggccccggccgtggttcaggtgcaggctcgctg
gttgcctatgcgctgaccatcaccgatgtcgatccgctgcgtttctcgctgctgttcgag
cgcttcctcaaccccgaccgcgtctcgatgcccgacttcgacatcgacttctgccaggac
cgccgcgaagaggtgatccgttatgtggtcggcaagtatggtcgcgaccaggtcggtcag
atcatcaccttcggtacgctgcaggcgcgcgccgtgctgcgcgacgttggccgcgttctg
cagatgccttatgggcaggtcgacaagctcaccaagatggtgccgcagaacccggccaat
ccggtgacgctggcccaggcgatcgagggcgagccgcgctttgccgaggaggcagaacgc
gagccgatcgtgcagacgctgctcgacatggcacagaagctcgagggcctctaccgccac
gcctcgacgcacgccgccggcattgtcatcggtgaccgcccgttgtccgaactggtgccg
atgtatcgagacccgcgctcggacatgccggtcacccagttcaacatgaaatatgtcgag
caggccggactggtgaagttcgacttcctcggcctgaagacgctgacggtgctgcaaaag
gcggtgcatttcatcagccgcaagggcgtcgacatcgacctcgcgctgatcccgctcgac
gatccgctgacctacgccatgctgtcgcgcggcgagaccgtcggcatctttcaggttgaa
agtgccggcatgcgcaaggcgctgatcggcatgaagcccgaccaggtcgaggacatcatc
gcgctggtggcactctaccgccccggcccgatggagaacatcccgacctacaacgcccgc
aagcatggtgacgaggagatcgcctcgatccatccgatgatcgactatctggtgaaggag
acgcaaggcgtcatcgtttaccaggagcaggtcatgcagatcgcgcaggtgctgtcgggc
tattcgctcggcgaagccgatctgctgcgccgcgccatgggcaagaagatccgcgccgag
atggacaagcagcgcgagcgcttcgtcaccggcgccatggagaaaaaggtcagcaaaccg
caggccaacgccatcttcgacctgctcgccaagtttgccgactacggcttcaacaagtcg
cacgccgcagcctacgccatcgtctcctaccagacggcgtatctgaaagcacactatccg
gtcgagttcctcgcggcctcgatgacctacgatatgtccaacacggacaagctgaacgac
ttccgccaggatgcgatgcggctcggcatcgatgtcgtgccgccgtcggttatgaccagc
ttccgcgacttcgaggtcggcgagaagaagatcttctactcgctcgccgcgatcaaaggc
gtgggtgaggcggcggtgcaccacatcgttgccaagcgccaggaaaagcccttcgccagc
ctcgccgacttctgcgagcgcatcgacccgaaactggtcggcaagcgtgtctttgaaagc
ctgatcatggccggcgcgctcgactgtttcggccacgagcgcgcggcgatgatggcgggc
atcgagcgcatgatgggccttgcctcccgcgcccacgaaaatgccacccttggccagtcc
gacatcttcggcagtgctgcctcagggcaggcgccgtcgctgcacctgccggtcgccgac
gcctggcttgccgccgatcgcctgcatcgcgaattccaggtcgtcggcttctacctctcg
gcgcatccgctcgacgaatacaaggccgcacttgagaagatgcgcgtccagaattgggcc
gactttgccgctgccgtgaagcgtggtgcgactgcagggcgtctggccggtaccgtcacc
accaagcaggaacgcaagaccaagactggtaacaagatgggcatcgtccagttctctgac
gtttcgggccagtatgaagcggtgatgttctcggagacgctggcgcagtatcgcgacctg
tgtgaacccggcaaatcggtggtcgtcaccgttgccgccgaggatcgccccgaaggcgtc
aacctgcgcatccagactgtgcagtcgctcgaggacgaagcgagccgggtgcagaagacg
ctgcgcatcttcgtgcgcgacgcggctccgctcaacatgctgtccaaccagctgacggtg
cgcggcgaaggcgaggtaagcttcatcgtgctcaagggcgaggccgagggcgagatcgaa
atcgagctacgtgaacgctaccgcatcacgccgtcgatcgcttcggcgatgcgcgccgtg
ccgggagttgtcgaggtcgagctggtctag
DBGET
integrated database retrieval system
