Aminobacter sp. NyZ550: N7E70_017510
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Entry
N7E70_017510 CDS
T11159
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
amio Aminobacter sp. NyZ550
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
WAX93479
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Position
complement(3510091..3512553)
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AA seq
820 aa
AA seq
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MAAEKLRTYRQKRDFTRTREPRGVEQAGEGNRFVVHKHHATADHYDLRLELDGVLKCWAV
PRGPSLNPADKRLAVETEDHPLEYIDFEGLIPEGEYGGGPMIVWDGGVWAPMEDARASLD
KGAFKFRLWGEKLKGGWMLARLKPKPGEDKRNWLLFKEHDPAADETTDILEARPESVKSG
RRIEELVVVPRKPPPPKPGDPKPDKLAGAVRAPMPARIEPQLATAAPKPPSGEGWLHEIK
FDGYRTMVHLEGGTARLITRSGIDWTKRYGKLSAAFRDLPCSDAVIDGEIVVLDDKGISR
FAALQDALASGHDELLVFYAFDLLHLNGWGLTGVELGKRKDLLETLLAGHVHAQSALQVS
GHVEGDGQALYDQATEMGLEGVVSKRSSAHYTPGRSHSWTKTKAPIPGDFVIAGYTTSQA
AEGLAALALGEWVDGELQYRGKVGTGFDAETLQSLLHRLEGLREGAAKLDGAPKEVIPVR
PVLNARIHYANRTADNALRHAVFKGLREAELSEAPLASRKRLITDADLAAVTITNPERRM
LGKSGPTKLDIAVYYAAVGDFMLPHIMGRPVSLFRCPTGQHKDCFFQRHAFTGMPATIAR
FETKNSEDETKTYISVEDAKGYLALAQFGVVEFHVWGALRKRLDKPDRVVFDLDPGEGIG
WREVVEAAVHVRDELTKMGLVPFVKTSGGSGIHVVVPTTGKLGWKQFHQASSEISSRIAR
TAPDTFTTVMGKDNRKKRIFIDFHRNARSATAAAPYSLRARTNMPASTPLSWADLESIDA
PADLNYSSLPGLVARSGDPWADISDHAKDLPVEVTAKSKS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggaaaagcttcgcacctaccggcaaaagcgcgatttcaccaggacgcgcgag
ccacgcggcgtcgaacaggcgggcgagggcaaccgcttcgtcgtgcacaagcaccatgcc
accgccgaccactacgatctgcgcctcgaactcgacggcgtgctcaagtgctgggcggtg
ccgcgcgggccgtcgctcaatccggccgacaagaggcttgccgtcgagaccgaggaccat
ccgctcgaatatatcgacttcgaaggcctgatccctgaaggtgaatatggcggcgggccg
atgatcgtctgggacggcggcgtctgggcgccgatggaggacgcccgggcgtcgctcgac
aaaggcgcgttcaagttccggctctggggcgaaaagctcaagggcggctggatgctggcg
cggctgaagccgaagccgggcgaagacaagcgcaactggctgctgttcaaggaacatgac
ccggcggccgacgagacgacggacattctcgaagcgcggccagaaagcgtaaagtccggg
cggcgcatcgaggagctggtcgtggttccgaggaagccgccgccaccgaagcccggcgac
cccaagcccgacaagctcgcgggggcggtgcgggcgccgatgccggcgcggatcgaaccg
cagctggccacagcagcacccaagccgccgtcgggcgagggttggctgcacgagatcaag
ttcgatggttatcgcaccatggtgcatctggaaggcggaacggccaggctgatcacccgc
agcggcatcgactggacaaaacgttacggcaagctttcggcggcgtttcgcgacctgcca
tgcagcgacgcggtcatcgatggcgagatcgtcgttcttgacgacaagggcatcagccgg
tttgccgccttgcaggacgcgctggccagcgggcacgacgagctcctggtgttctacgcc
ttcgatcttctgcatctcaacggctggggcctgacgggcgtagagcttggcaaacgcaag
gacttgctggagactcttcttgccggccatgtccacgcgcagtcggcgctgcaggtcagc
gggcatgtcgagggcgacggccaggcattgtacgaccaagcaaccgagatggggctcgag
ggcgtcgtgtcgaagcgcagctctgcgcactacacccccggccgctcgcacagctggacc
aagaccaaggcgccgataccgggcgacttcgtcattgccggctatacgacatcgcaagca
gccgaggggctcgctgcccttgcgctcggcgaatgggtcgacggcgagctacagtatcgc
ggcaaggttggaaccggcttcgacgccgagacgttgcagtcattgctgcaccggctggag
gggctgcgcgaaggtgcggcgaagctcgatggcgcgccgaaggaggtcatccctgtgcga
cccgtgctcaatgcccgcatccactacgccaaccgcaccgccgacaatgcgttgcggcat
gcggtgttcaaggggctgcgcgaggccgagctgtcggaggcgcccctggcctcgcgcaag
cggctgatcaccgacgccgaccttgccgccgtcaccatcaccaatccggagcgccggatg
ctcggcaagtcagggccgaccaagctcgacattgccgtctattacgccgccgtcggcgat
ttcatgctgccgcacatcatggggcggccagtgtcgctgttcaggtgcccgaccggccag
cacaaggactgtttcttccagcgccacgccttcaccggcatgccggcaaccatcgcgcgg
ttcgagaccaagaactccgaggacgagacaaaaacctacatttcggtcgaggatgccaag
ggctacctcgcgctggcgcagttcggcgtcgtcgagtttcatgtctggggtgcattgcgc
aagcgcctggacaagcccgatcgggtcgtcttcgatctcgatccgggcgaggggatcggc
tggcgcgaggtggtcgaggcggccgtgcatgtccgcgacgagctgacgaagatggggctg
gtgccgttcgtgaagacctcgggcggcagcggcatccacgtcgtcgtgccgacgacaggc
aagctcggctggaagcagttccatcaggcaagcagcgaaatctcgtcgcggatcgccagg
accgcgcccgacactttcaccaccgtgatgggcaaggacaaccgcaagaagcgcatcttc
atcgacttccaccgcaacgcgcgcagcgcgaccgccgctgcgccctacagtcttcgcgcc
cgcaccaacatgccggcgtcgactccattgagctgggccgatctcgagtccatcgacgct
ccagcggatttgaactattcttcgcttcccggacttgtggccaggtcgggcgatccttgg
gcagacatatcagatcatgccaaggacttgccggtcgaggtcactgccaagagtaagtct
tga
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