Aminobacter sp. NyZ550: N7E70_018635
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Entry
N7E70_018635 CDS
T11159
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
amio Aminobacter sp. NyZ550
Pathway
amio02024
Quorum sensing
amio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N7E70_018635 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N7E70_018635 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amio03019
]
N7E70_018635 (hfq)
03036 Chromosome and associated proteins [BR:
amio03036
]
N7E70_018635 (hfq)
Messenger RNA biogenesis [BR:
amio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
N7E70_018635 (hfq)
Chromosome and associated proteins [BR:
amio03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
N7E70_018635 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Motif
Other DBs
NCBI-ProteinID:
WAX93690
LinkDB
All DBs
Position
complement(3748932..3749177)
Genome browser
AA seq
81 aa
AA seq
DB search
MAERSQNLQDLFLNSVRKSKNPLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHA
ISTIMPSQPVQMFDGEESQGG
NT seq
246 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacgatcgcagaatcttcaggatcttttcctgaattcagttcgcaagagcaaa
aacccactcaccattttcctgattaacggcgtgaagttgaccggagtagtgacctccttc
gacaatttctgtgttttgttgcgccgtgacgggcactcgcagctcgtctacaagcatgcc
atctccacgatcatgccgagccagccggttcagatgttcgatggcgaggaaagccagggc
ggctga
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