Aminobacter sp. NyZ550: N7E70_020265
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Entry
N7E70_020265 CDS
T11159
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amio Aminobacter sp. NyZ550
Pathway
amio03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amio00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N7E70_020265 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amio03019
]
N7E70_020265 (recQ)
03400 DNA repair and recombination proteins [BR:
amio03400
]
N7E70_020265 (recQ)
Enzymes [BR:
amio01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N7E70_020265 (recQ)
Messenger RNA biogenesis [BR:
amio03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
N7E70_020265 (recQ)
DNA repair and recombination proteins [BR:
amio03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N7E70_020265 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HRDC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
WAX93997
LinkDB
All DBs
Position
complement(4070646..4072445)
Genome browser
AA seq
599 aa
AA seq
DB search
MTATALDILKTVYGYDAFRGPQARIVEHVIAGNNAFVLMPTGGGKSLCYQIPAIVRPGMG
LVVSPLLALMADQVTALRQAGVRAAGLNSDLSPDDRRALWRDIRSGALDLLYVSPETLLR
PDVLELLESVKLSLIAIDEAHCLSQWGHDFRPSYRQLDAIVSRFAGTPRMALTATADEPT
RAEILSHLEIDAADAFIAGFDRPNIRYAIEEKDNPRAQLKEFLKRYEGESGIVYCLSKRR
TEETAAWLKGLGYDALAYHAGMDKAAREANQMRFQHGEAVIMVATVAFGMGIDKPDVRFV
AHIDLPGSIEAYYQETGRAGRDGLPSDTLMLYGYDDIALRSRFIEESDAPDQRKRMERQK
LDALLGLAETASCRRQVLLSYFGDECEPCGNCDTCAEPPKLFDGAISAQKALSCIYRTGE
RFGQAYVVDVLLGVDNERIAQFGHDRISTFGIGTEHDNRTWRAILRQLIALRLVDVDLSG
HGGLSIASAGREFLRDKPTLMLRVPAPVRARRGKVARSAAQAAVSDADQDLFQALRRKRT
EIARAQNVPPYVIFHDKTLIELAAARPASRAEMASVPGVGEAKLDRYGPAFLEVIATHE
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccaccgctctcgacatcctcaagaccgtctacggctatgatgcgttcagggga
ccgcaggcgcggatcgtcgagcatgtcatcgccggcaacaatgccttcgtgctgatgccg
acgggcggcggcaagtcgctctgctaccagattcccgcgatcgtccgtcccggcatgggg
ctcgtcgtctcgccgctgctggcgctgatggccgatcaggtgacagcgctcaggcaggca
ggggtgcgggcggccgggctgaactccgacctgtcgcccgacgaccgccgcgcgctgtgg
cgggatatccgttccggtgcgctcgacctgctctatgtctcgcctgaaaccttgctgcgg
cctgatgtgctggaactgctggagagcgtgaagctgtcgctgatcgccatcgacgaggcg
cactgcctgtcgcagtgggggcatgacttccgtccgtcctatcgccagctcgacgcgatc
gtttcgcgctttgccggcaccccgcgcatggcgctgaccgccaccgccgacgagccgacg
cgcgcggaaatcctgtcgcatctcgaaatcgacgcggctgacgccttcatcgccggtttc
gaccggcccaacatccgctacgccatcgaggaaaaggacaatccgcgcgcccagctcaag
gagttcctcaagcgctacgagggcgagagcggcatcgtctattgcctgtcgaaacgccgg
accgaagaaaccgccgcctggctcaagggcctcggctatgatgcgctggcctatcacgcc
ggcatggacaaggcggcgcgcgaggccaaccagatgcgcttccagcatggcgaggcggtg
atcatggtcgccaccgtcgccttcggcatgggcatcgacaagccggatgtgcgcttcgtc
gcccatatcgacctgcccggcagcatcgaggcctactatcaggagaccggtcgcgccggc
cgcgacggcctgccgtccgacacgctgatgctctatggctatgacgatatcgcgctgcgc
agccgcttcatcgaggagtctgatgcacccgaccagcgcaagcgcatggagcggcagaag
ctcgatgcgctattgggcctggccgagacggcaagctgccggcggcaggttttgctgtcc
tatttcggcgacgagtgcgaaccgtgcggcaattgcgacacctgtgccgagccgccgaaa
ttgttcgacggcgccatttcggcgcaaaaggcgctgtcatgcatctaccgcaccggcgag
cgtttcggacaggcctatgtcgtcgacgtgcttctgggcgtcgacaacgagcgcatcgcc
cagttcggccatgacaggatttccaccttcggcatcggcaccgaacatgacaaccgcacc
tggcgggcgatcctgcgccagctgatcgcgctacgcctcgtcgacgtcgacctttccggc
catggcggcctgtcgattgcatcagccggccgcgaattcctgcgcgacaagccaacgctg
atgctgcgcgtgccggctccagtgcgcgccaggcgcggcaaggtcgcgcgcagcgcggcc
caggctgccgtcagcgatgctgaccaggacctgttccaggcgctcaggcggaagcgcacc
gagatcgcgcgggcccagaacgtgccgccctatgtcatcttccacgacaagacgttgatc
gagctggccgcagccaggccggcgtcacgtgctgagatggccagcgtgcccggtgtcggc
gaagccaagctcgaccgctatggcccggccttcctcgaggtgatcgcaacacacgaatga
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