Aminobacter sp. NyZ550: N7E70_020750
Help
Entry
N7E70_020750 CDS
T11159
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
amio Aminobacter sp. NyZ550
Brite
KEGG Orthology (KO) [BR:
amio00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amio03009
]
N7E70_020750
Enzymes [BR:
amio01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
N7E70_020750
Ribosome biogenesis [BR:
amio03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
N7E70_020750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
WAX94089
LinkDB
All DBs
Position
complement(4187939..4190125)
Genome browser
AA seq
728 aa
AA seq
DB search
MDDDRKKFPRKGGSKPAGAGGRDGGAKKFGKPRSEGGAKPFAKKPFVKRAEGAEGGERPK
RDFRPRDGEARAERPFNKGPRPEGKPYEKREGGRSFGGDKPFAKKPYRARAVEGAEGRER
PRRDFAPRDGEARAERPFHKGPRPEGKPYEKREGGRSFGGDKPYRARPAEGGERPQREFR
PRDGEARAEGGERPFRKGPRPEGKPYEKREGGRSFGGDKPYRARPAEGGDRPQREFRPRD
GDARPAGGDRPYRARPEGGKPFEKRGEGFKPRPRASEDAPEPGERIAKRLARAGLASRRD
AEELIAAGRVKVNNKVLASPAVNVMPDDIIHLDGMEIPPIERTRLFLFHKPAGVVTTNRD
PEGRKTVFDVLPQELPRLMTIGRLDINTEGLLLLTNDGGLSRVLELPATGWLRRYRVRVH
GKVEQKTLDGLRDGIAVEGVFYGSIEATLDREQGSNAWITIGLREGKNREVKNILGALGL
EVNRLIRISYGPFQLGELPEGHVQEIKGKMLRDQLGERLIEESGANFDADIVKPFSNKPT
FRREERREEEAPRAPRAPRLDIGEGGLIKNRKRDRERHREDVLGRLSTERPAGFGDKPSF
GDKPRFGDKPRSGDRPKFGDKPKFGDKPRFGDKPKFGGKKGDEREKKPFETPGARKTNVW
MAPGARPQSEKAKADAASKPRFDKSRSDKPRSDRPRSDRPHSDRPHSDRPGGDGPRGGRP
GGPRRDRG
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgatcgtaagaaattcccccgcaagggcgggtcaaaaccggctggagcgggc
ggccgtgacggcggtgccaagaaattcggcaagccgcgcagcgaaggtggcgcaaaaccc
tttgccaagaagccgttcgtgaagcgcgccgaaggtgccgagggcggcgaacgcccgaag
cgcgatttccgcccgcgcgacggcgaggcgcgcgccgagcggccgttcaacaaggggccg
cgccccgaaggcaagccgtatgaaaagcgcgaaggcggccgctcgtttggcggcgacaag
ccctttgccaagaagccctatcgtgcgcgcgccgtcgaaggtgccgaaggccgcgaacgc
cccaggcgcgatttcgcgccgcgtgatggcgaagcccgcgccgagcgtccgttccacaag
ggcccgcgccctgaaggcaagccatatgaaaagcgcgaaggcggtcgttcctttggcggc
gacaagccgtaccgtgcgcgcccggccgagggaggggagcgtccgcagcgtgaattccgt
ccgcgcgacggcgaggcgcgcgctgaaggcggcgagcgtccgttccgcaagggcccgcgc
cccgagggcaagccatatgaaaagcgtgaaggcggccgctcgtttggcggtgacaagcct
tatcgtgcccgtcctgccgaaggcggcgatcgtccgcagcgcgagttccgcccgcgcgac
ggtgatgcgcgcccggcaggcggcgatcgcccgtaccgcgcgcgccccgagggcggcaag
cccttcgaaaagcgcggcgaaggcttcaagccgcgcccgcgtgcttccgaggatgcaccg
gagccgggcgagcgcatcgccaagcgcctggcgcgcgccggcctcgcctcgcgccgcgat
gccgaggagctgattgctgccggccgcgtcaaggtcaacaacaaggtgctggcgtctccg
gcggtcaacgtcatgcctgacgacatcatccatctcgacggcatggaaatcccgccgatc
gagcgcacccgcctgttcctgttccacaagccggccggcgtggtcaccaccaaccgcgat
cccgagggccgcaagaccgtcttcgacgtgctgccgcaagagctgccgcgcctgatgacg
atcggccgcctcgacatcaacaccgaaggcctgttgttgctgaccaatgatggcggcctg
tcgcgcgtgctcgaactgccggcgaccggctggctgcgccgctaccgcgtgcgcgtccac
ggcaaggtcgagcagaagacgctggacggtctcagggacggcatcgccgtcgagggcgtg
ttctacggctcgatcgaggcgacgctcgaccgcgagcagggcagcaatgcctggatcacc
atcggcctgcgcgaaggcaagaaccgcgaggtcaagaacatcctcggcgcgctcggcctc
gaggtgaaccgcctgatccgcatctcctatggcccgttccagctcggcgagctgccggag
ggccatgtccaggagatcaagggcaagatgctgcgcgaccagctcggcgagcggctgatc
gaggagtcgggggccaattttgacgccgacatcgtcaagccgttctccaacaagccgacc
ttccgccgcgaggaacgtcgcgaggaagaggcgccgcgcgccccgcgtgcgccccgcctc
gacatcggcgaaggcggcctgatcaagaaccgcaagcgcgatcgcgagcgtcatcgcgag
gacgtgctgggccgcctgtcgaccgaacgccctgccggcttcggcgacaagccgagtttc
ggtgacaagccaaggttcggcgacaagccgagatccggggaccggccgaaattcggggac
aagcccaagttcggcgacaagcccaggtttggcgacaagccgaaattcggcggcaagaag
ggtgacgagcgcgaaaagaagccgttcgagacgcctggtgcgcgcaagacaaatgtctgg
atggctccgggcgcgcgtccgcagagcgaaaaggccaaggccgatgccgcgtcgaagccg
cgcttcgacaagtcgcgttccgacaagcctcgttccgacaggcctcgttccgacaggccc
cattctgacagaccccattctgacagaccgggcggcgacggcccgcgcggtggacggccc
ggcggtccgcgccgggatcgcggctga
DBGET
integrated database retrieval system
