KEGG   Anarhichas minor (spotted wolffish): 142933765
Entry
142933765         CDS       T11660                                 
Symbol
tdp1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
amir  Anarhichas minor (spotted wolffish)
Pathway
amir03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:amir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    142933765 (tdp1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amir03400]
    142933765 (tdp1)
DNA repair and recombination proteins [BR:amir03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     142933765 (tdp1)
SSDB
Motif
Pfam: Tyr-DNA_phospho RMMBL
Other DBs
NCBI-GeneID: 142933765
NCBI-ProteinID: XP_075934097
LinkDB
Position
Unknown
AA seq 619 aa
MSQDSQHGRWTISSSDDDDEAIPLSGTTMSGPHRPALSSHGSHPSASPPSPKVEPVTAAV
EVKPEPANAPVPSLVVGSEARQSAATNQLNPVKCETTPSLAGKRKKEASDGSSWALSDSD
DDDGDVKGKGLVKRGPPSPKTKKPKEETERPPSPHGRLYYIDEPEDFFESSVPCLNDTYR
FYLNKVTGLDRKYNSGALHIRDILSPLFGTLKESAQFNYCFDLAWMVKQYPPEFRDRPVL
IVHGDKREAKARLLKQAQPFPHIRFCQAKLDIAFGTHHTKMMLLWYEEGFRVIILTSNLI
RADWYQKTQGMWMSPVFPRLPEGSDDSAGESPTFFKRDLLEYLASYRAPELEEWIRRIKE
HDLSEARVYLVGSTPGRYVGSDMERWGHLRLRKLLYDHADPVPGEERWPVIGQFSSIGSM
GVDKTKWLTGEFQRTMTTLGKSSLRPEPPMHLVYPSVEDVRTSLEGYPAGGSLPYSIQTA
QKQLWLHSFFHRWKATATGRSHAMPHIKTYMRASPDFTQLAWFLVTSANLSKAAWGALEK
SKTQVMVRSYELGVLYVPSAFNMKTFPVHKSQFPVSSSAGFPVPFDLPPTCYSPKDQPWI
WNIPYSQPPDTHGNIWVPS
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgtctcaggacagtcaacatggcaggtggaccatctccagcagtgacgacgatgacgag
gctattcctctctctgggaccacaatgtccgggccccaccgacccgctctatccagtcac
ggctcccatccgtctgcttcaccccctagccccaaagtggaaccagtaacagccgctgtg
gaggtgaaaccagaaccagctaacgcccctgtaccctcacttgtcgtcggctctgaggcc
agacagtcggcagcaacgaaccagttgaatccagtgaagtgtgaaaccactccgtcgttg
gctggaaagcggaagaaagaggcgtcggacggctcaagctgggctctctcagatagcgac
gatgacgatggagatgtgaaggggaagggcctcgttaagaggggccctccgagccccaaa
acgaagaaaccgaaggaggagaccgagcgccctccgagtccccacggtcgcctctactac
atcgacgagccagaggacttctttgagtccagtgttccttgtttgaacgacacctacagg
ttttacctcaacaaggtcacagggctggacaggaagtacaacagtggggctctgcacatc
agagacattctctcgccattatttgggaccctgaaagagtctgctcagtttaactactgc
tttgatttagcctggatggttaagcagtacccaccagagtttagggatcgtccagttctg
atcgtccacggagataagagggaggccaaggcccggctgctcaagcaggctcagcctttt
ccacacattcgcttctgccaggccaagctggatattgcttttggaactcaccacacgaag
atgatgttgctgtggtacgaggaaggcttcagagtcatcattctgacctccaacctcatc
agagctgactggtaccagaaaacacaagggatgtggatgagccccgtgtttccacggtta
ccggagggcagcgatgacagcgcaggcgagtcaccgaccttcttcaagagggacctgctg
gaatacctggcgtcgtaccgcgcaccagaactcgaggagtggatccggcgaatcaaagag
cacgacctgtcagaggccagggtttatttggtcggctcaacccctgggaggtatgttggc
tcagacatggagcgctggggccacctgaggctgaggaagctgttgtatgaccacgcagat
cctgttcccggggaggagaggtggcctgtgattggccagttctccagcatcggctctatg
ggagtggataagaccaaatggttgacgggggaatttcagcgcaccatgaccacgctgggg
aaatcctctcttcgcccagaaccccccatgcacttggtgtatccatcagttgaagatgtg
aggactagtttagaaggctatccagcgggaggctctcttccctacagcatccagacggct
cagaaacaactctggctccactccttcttccaccgttggaaggcaactgcaacaggaagg
agtcatgccatgccacacatcaagacctacatgagggcgtcaccagatttcactcagctt
gcctggttcctcgtcacaagtgccaacctgtccaaagcagcctggggtgcgctggagaag
agcaagactcaggtgatggtccgttcatacgagctgggagtcctctacgtgccctctgcc
ttcaacatgaagaccttccccgttcacaaaagtcagtttcctgtctcctcctctgctggt
ttccctgtgccctttgacctcccccccacatgctactctcctaaagatcagccttggatc
tggaacattccgtacagccagcctcccgacacacacggcaacatctgggttccctcctga

DBGET integrated database retrieval system