Anarhichas minor (spotted wolffish): 142944713
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Entry
142944713 CDS
T11660
Symbol
col5a3a
Name
(RefSeq) collagen, type V, alpha 3a isoform X1
Organism
amir Anarhichas minor (spotted wolffish)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
142944713
NCBI-ProteinID:
XP_075941898
LinkDB
All DBs
Position
Unknown
AA seq
1867 aa
AA seq
DB search
MDHLIRTKSRRRIPLFICILLHVTTTHTADPIDVLQVLELSENMEGVSLETGLCTSRRGF
EEPDLAYKIDKKIQLSAPTKQLFPDSTIFPENFSVMATVRAKMGSQFFLLSVYDDQGVQQ
LGLEVGRSPVFLYEDQHGQPTPEMYPIFKKINLADGKWHRIAYSVQGKSVTLYLDCQWKE
TLDLLRGDNAVVSTAGVTVFGTRLLDKDVFEGDIQQLLILEDPQAAANYCGNYIPDCDSA
LPYNSKSLVLQENSQLRSDFLKQSDQPDEPKEHSKKDRKGKKKRDKGSKGKRKGKGKGKG
KGKGKKRSRKKKHEEEGLEDGFLRVSTTVPEYLSQGPFQPTDLPEIPTEVLDETLMEMPT
HEPDSTAEAPTVVPSTLPESKVTEEEDRPVKKPVIEEHGEDLYGDLYDDPSVSTVTDGPI
VNEYAVLEYEDYKNDTESEYEEYEVYDDGFEFAERESAETWDGEVSLRAEKGQKGEPAII
EPGTLVEGPPGLPGPQGLTGPAGPTGPPGPWGDPGELGPQGRPGLAGVDGIPGPPGTLLM
LPFQYGGDSQKGPVVSPMEAQAQAILQQTKLSLKGPPGPLGLAGRPGPLGVPGPTGLKGD
SGESGPSGSHGLQGPLGTTGKPGKRGRAGGDGGRGAPGETGSKGDRGFDGLPGLPGDKGH
RGDRGKPGPHGPVGEPGEKGSDGPAGTRGQPGEPGSRGLVGPRGPAGPPGQPGIRGTDGV
QGSKGNLGPSGEIGPPGQQGNPGVQGLLGPQGPIGLPGEKGPQGKQGMLGVPGIDGPTGH
PGREGPAGEKGIQGLPGAQGPVGYPGTRGVKGGDGVRGLKGSKGEKGEDGFPGFKGDMGI
MGDRGDNGGSGARGEDGPEGPKGQTGLLGDLGALGIAGEKGKLGVPGLPGYPGRQGPKGT
LGFPGGAGVSGEKGRRGPAGQPGLGGQRGPNGAQGGRGAKGPTGKPGEKGSAGQEGPPGS
PGEQGPQGPQGRNGEPGLRGTNGPPGKDGLPGHPGQRGEPGFQGKNGPPGPLGVVGPQGN
SGETGPTGDRGHPGSPGPPGEHGLPGSAGKEGAKGDPGPSGASGKSGPTGLQGFRGSRGT
PGAMGPAGLKGGEGLPGVAGLIGATGERGPAGPAGAIGQPGQPGGVGLAGPMGEKGEPGE
KGPVGPAGHDGELGPLGLPGAAGSPGPPGEDGDKGETGGPGQKGSKGDKGEAGPQGPVGS
QGPVGQQGLPGADGEPGPRGQQGMNGVKGDEGHRGFKGASGPSGLQGMPGQPGEKGESGH
VGSMGTPGQHGPRGPQGSIGREGPPGMSGGVGQPGIVGEKGEDGETGNPGSAGELGIAGA
KGDVGEKGDSGPHGAAGPPGPRGTPGEDGPKGNPGPLGFPGDSGPPGESGINGVDGGPGP
KGDNGESGKAGPPGASGEPGPSGPPGRRGYIGAAGNEGKQGMKGAKGTTGTQGPVGKTGP
VGPQGQPGRSGPEGLQGIPGSAGEHGLNGPPGQIGPPGPIGPQGLPGLKGDPGNKGDKGY
GGLIGLIGPPGEHGEKGDRGLPGIQGTQGPKGDEGTPGTRGPTGPLGPSGLSGTAGDKGS
KGEIGFVGPRGDRGLAGPPGLPGPPATMIEPLPIREGRRKRRRHSDRAGGAAPFREEDVD
LEELPQGDQPLEDAEGMEEVFAILSSMKTEVEVMRRPLGSFESPARTCKELIMVQPGYKD
GDYWIDPNQGCHRDSIKVYCNFTADGETCLYPDKRIENVKLAAWNKEKPGSWYSQYRKGK
QFSYSDRDGNPVHVVQLTFLKLLSATAKQSFTYTCQNSAGWFDRTSRSHQRALRFRGSND
EELTQAKSPFINAVHDGCQFRKGQERTELEIDSPSAELLPIIDVAPADFGSSNQKFGFQV
GRVCFNG
NT seq
5604 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttaataaggaccaagtcgcgcaggagaataccgctatttatttgtatcctg
cttcacgtgacgacgacacacactgctgatcccattgatgttctgcaagtgctggagctg
tcagagaacatggagggggtgtctctggagactggtctctgcaccagcaggaggggcttt
gaggagccggacctggcctacaagatagacaaaaagattcagctcagtgctccaaccaaa
cagcttttccctgattcaaccatatttcctgagaatttctccgtgatggctacagtgcga
gctaaaatgggctcccagttcttcctgctttcagtgtatgatgaccagggggtgcagcag
ctgggcctggaagtgggccgttcacccgtcttcctgtatgaggaccagcatgggcagccc
acaccagaaatgtatcccatcttcaaaaagatcaacctggctgatggaaaatggcacagg
atagcctacagtgtgcagggcaagtctgtgaccctctacctggactgtcagtggaaagag
accctggatctgctgcgaggggacaacgctgtagtcagcacagcgggtgtcactgtgttt
gggacacggctgctggacaaagatgtatttgagggagatattcagcaactactcatcctg
gaggacccgcaggctgctgctaactactgtggaaactacataccagactgtgactctgct
ttgccctacaacagcaaatccctggtcctgcaggagaactcccaactcaggtctgatttc
ctaaagcaaagtgaccagcctgatgaaccaaaggagcactccaaaaaggacaggaaaggc
aaaaagaagagggacaagggctctaaaggcaaacgcaaaggcaaaggcaagggcaaaggc
aaaggcaagggcaagaagagatccagaaagaaaaaacatgaagaggagggtctcgaggat
ggcttcctcagagtgtccacaacagtgcctgagtatctatcccaaggaccttttcagcca
acagatttgccagaaatccccactgaagtgctcgacgagaccctcatggagatgcccaca
catgaacctgactccacagctgaggcccccactgtggtgcccagcactttgcctgaatca
aaggtcactgaggaggaggacaggccagtgaagaagccagttatagaggagcatggagag
gacctttacggagacctctacgacgatccctcagtttccacggtaacagatggcccgatt
gttaatgaatacgcggttctcgagtatgaagattacaagaatgacacggagtcagagtac
gaagagtacgaggtatatgacgacggctttgaatttgcggagcgggaaagtgcagagacg
tgggatggagaggttagcctcagagcagagaagggccagaagggagagccagctattatt
gagccgggtacattagtggaaggacccccaggtctaccagggccacagggcctcactggc
ccagctggaccaacaggccctccaggaccatggggagatcctggtgaattgggtccccaa
ggacgtcctggtcttgctggggttgatgggattccaggtcctccaggaaccctgttgatg
ctaccattccagtatggcggtgattcccagaagggaccagtggtgtctcccatggaggca
caagcacaggctatactgcaacagaccaagctgtcactgaagggacctccaggtccactg
ggtctagcagggcgaccaggcccactgggagtaccaggtcccactgggctcaaaggggac
agcggagaaagtggcccttccggatcgcatgggttgcaaggccctctaggaactactgga
aagccaggaaagagggggcgtgcgggaggtgacggaggccgtggagctccaggagaaaca
ggatctaagggtgacaggggtttcgacggcctgccaggtctcccaggagacaagggacac
agaggggacagaggaaagccgggtcctcatgggcctgttggagagccaggagaaaaggga
tctgatggacctgcggggacaagagggcaaccaggcgagcccggttctcggggtcttgtt
gggccaaggggaccagctggcccacctggtcagccgggtattcgtggaactgatggagta
caagggtcaaagggcaacctgggtccatctggagagatagggcccccaggtcaacaggga
aatccaggagtccagggcttgcttggtcctcagggtcccattggattgccaggagagaag
ggtccccaggggaaacaaggcatgctgggagtaccaggcattgatggcccaaccggtcat
ccaggaagagagggccccgcaggagagaaaggcatccaaggtttaccaggcgctcagggg
cccgttgggtacccagggacccgtggagtcaagggaggagatggagttaggggtctaaag
ggaagcaaaggagagaagggggaagatggcttccctgggttcaaaggtgatatgggcatc
atgggagacaggggtgataacggaggttctggtgctcgtggagaggatggaccagaaggg
ccaaagggccaaacaggactcttgggagatttaggagctctcgggatagctggcgagaag
ggtaaacttggtgtgcctggattgccaggataccctggccgacaaggtcctaagggaaca
cttggcttccccggtggggccggggtctcaggagagaaaggacgaaggggtccagctggt
cagccggggctcgggggccaaagaggtcctaatggagcccaggggggaagaggagcaaag
gggcccactggaaagcctggagaaaagggttctgctggacaagagggtcctccaggttcc
cccggagaacagggcccccaaggaccacagggacgaaacggtgaaccaggacttcgaggg
accaatggtccacccggaaaagatggattaccgggtcatccaggccagagaggggaacca
ggcttccaaggcaaaaacggaccccccggccccttaggtgttgtaggaccacagggcaat
tctggtgagacaggaccaactggagacagaggccatccaggatcgccaggaccacctggt
gagcatggtttaccgggatctgccggaaaggagggtgccaagggagacccaggtccatca
ggagcctcagggaaaagtggccctactgggctgcaaggcttcagagggagcagagggacc
cctggtgcaatgggtcctgcaggtctgaagggaggagagggcctacccggtgtcgcagga
cttattggtgccactggagagaggggccctgctgggccggcaggcgctattggccagcca
ggacagcccggcggcgtgggtcttgctgggccgatgggagagaaaggcgagccaggagag
aaggggcctgtggggccggctgggcatgatggggaactgggaccgttagggctgccgggg
gctgcgggatctcctgggcctccaggagaggacggagacaagggagagacaggaggacca
ggccagaagggcagtaaaggagacaaaggagaagctggaccccaaggacctgttggaagt
caagggcctgtgggccaacaaggactgccaggtgcagatggtgagccaggtcctcgtggg
cagcagggcatgaacggggtgaaaggagatgaaggacacagaggctttaagggagcatct
ggtccttctggactacagggaatgccaggacaaccaggggagaagggagagagcgggcat
gttggctcgatggggactccaggacagcatggcccacgaggccctcaggggtccattggt
agagagggcccacctggaatgtctggtggagttggtcagcctgggattgttggagagaag
ggtgaggatggagaaactggaaaccctgggtcagctggagagcttggcattgctggtgct
aaaggtgatgtgggggaaaagggcgactctggccctcacggtgcagcggggcctccagga
cccagaggaacaccaggggaggacggccccaaaggcaaccctggccctcttggattcccc
ggagattcaggacctcccggagaatctggcatcaatggagtagatggtggaccggggcct
aaaggagacaatggagaatctggcaaagcaggacctccaggagcctctggagagccaggt
ccttcaggacctcctggacggaggggttatataggtgctgcaggaaatgaagggaagcaa
ggcatgaagggagccaaggggacaacagggacccagggtccagtggggaagacaggccca
gtgggaccccaagggcagccagggaggtctggcccggaaggtcttcaaggcatcccaggt
tcagcgggtgagcacgggttaaatgggccaccaggacaaatcggcccaccaggaccaata
gggccacaaggacttccaggattaaaaggagaccctggaaacaagggagacaaaggttat
ggtgggttgatcggcctaattggccccccaggagaacatggcgagaagggagacagaggc
cttcctgggatccagggtacacaagggcctaaaggagacgagggtacgcccggcacacgt
ggtcccactggcccactgggaccatctggactgtcaggtacagctggcgataagggatcg
aagggagaaataggttttgttggtcccagaggagatcgaggccttgctggacccccaggg
ctccctggaccccctgcgacaatgattgagcctctgcctatcagagagggcaggcggaag
agacgaaggcactccgatcgggcaggaggagccgctccattcagagaggaggatgtggat
ctggaggagttaccccagggagatcagcctctggaggacgccgagggaatggaagaggtc
tttgccatcctatcttccatgaaaacggaagtagaggtgatgaggaggcccttgggatcc
tttgagagccctgcccggacctgcaaagagctcattatggtccaaccgggctacaaagac
ggagactactggattgatcctaaccagggctgtcaccgagactccatcaaggtctactgt
aacttcacagctgatggagagacatgtctctaccctgacaagaggattgagaatgtgaaa
ttagcagcgtggaacaaagagaagccaggaagctggtacagccaatacaggaaaggcaag
cagttctcctacagtgacagggatgggaaccctgtgcatgtagttcagctgaccttcctg
aaactactgagtgccacggccaagcagagcttcacctacacctgccagaactcggcaggc
tggtttgacagaacctctcgttcccatcagcgtgccctccgctttcggggcagcaatgac
gaggagctgacacaggccaaaagccccttcatcaatgcggtgcatgatggatgccagttc
cgcaaaggtcaggaaaggactgaactagagattgactctccctcggcagagctgctccct
attatagatgtggctccagcagactttggcagcagcaaccagaagtttggattccaagtt
ggacgagtatgcttcaacggttaa
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integrated database retrieval system
