Anarhichas minor (spotted wolffish): 142956930
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Entry
142956930 CDS
T11660
Symbol
ndc1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
amir Anarhichas minor (spotted wolffish)
Pathway
amir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
142956930 (ndc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amir03019
]
142956930 (ndc1)
Messenger RNA biogenesis [BR:
amir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
142956930 (ndc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
142956930
NCBI-ProteinID:
XP_075954834
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MFSTEQSCWFVRKVICWRAVASIAWAVLLLLPITVVFVILSRFSLLHPIQTISECLSFLW
GASAIFSLILLCGVIIMVGFLNLEYYTVIPTIACSKIALLGQLLHPRQFVNSLAHCIMGI
IVAWCCAVTIGGRYETIGYPCTQGDGSDGSPQMCLNEYHLFLLLAGAFVGFSHSLLGVIY
NMNYVSFHTVQQYKYLRFKGSLPLVVKCSAAQALYSVRNYIVVYFFLGYIPKAWICKTLN
LHLNSSVHPLDSVAGLLDLSLLYHQWISASFLLFTWHVTLLLFRIFVTEVYSFPVQSSFT
EDAHQCLPKVLTDKQPMILKFLALQDLALLSQHSPSRRCEVFGLSQPGGHPHNWNAITQE
CLSLLADLTQRLIAYHDTVATNGRAKSLSTGSDRKTSSETSITSCPEDLMSPRPTLLMKT
PASVFARSIVGAPQSPLTAPFTPDLDSPFASPALRRLTAPMDQFSPGFGTVQSPHIMRRA
PKLWSTPTDSQVNGSPPASPFSVPSPKQEPSKPSRLAQFLQNRKEQVKHFLAKRVLIMYL
FNKLPEASSQALFADSQAHIWALEGLSYLVQASFSEDQFGVVQTTLPSILGCMLVLQEAV
DRHFKLPHASSKPVRSASSMGESAHKTLRFALRATLKTAIYRITTTFGNHLNAVQMSAEH
RKRLQQFLEYKE
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgttttctacagagcaaagttgctggtttgtccgcaaggtgatttgctggagagcggtg
gccagtattgcttgggctgtcctgttgttgctacccatcacagtggtttttgtaatcctc
agcaggttcagtctgctccaccccatccagacaatatccgaatgcctgtccttcttatgg
ggtgcaagtgccatcttctcattgatcctgctgtgtggagtgatcatcatggtggggttc
ctgaacctggagtattatacagtcatcccaactattgcatgctcaaaaatcgccctgttg
ggtcagctgctccaccctcgtcagtttgtcaactccctggcccactgcatcatgggaata
atcgtggcctggtgttgcgctgtcactatcgggggcagatacgagacgatcggctaccct
tgcacacagggtgatggcagtgacggttcccctcagatgtgtctgaatgaatatcacctc
ttccttctgctggctggagcctttgttgggttctctcacagtctgcttggcgtgatctac
aacatgaactacgtctcttttcacactgttcagcaatacaaataccttcgctttaaagga
tccctacctttggtggtgaagtgcagcgccgctcaagcactttactctgtcaggaactac
attgttgtgtatttctttttgggatacattccaaaagcatggatttgtaaaacactgaat
cttcatttgaacagctctgtccaccctctggacagcgtagctggactgctggacctctcc
ctgctctaccaccaatggatcagtgccagcttccttctcttcacctggcacgtcacactg
ctgctttttaggatatttgtcactgaggtctacagttttcctgtgcagtcatcttttacc
gaggacgcccatcagtgtcttcctaaagttctaacggacaagcaaccaatgatattgaag
ttcctagctctgcaggacttggctctgctgtctcaacactccccatcaagacgctgtgag
gtcttcggtctgagtcagccaggtggccatcctcacaactggaatgccatcactcaggag
tgtctgtctctgctggctgatctgacccagagactcatagcctaccatgacactgtagca
accaatggcagggccaaatcactgtctactgggagtgacaggaagacctcgtctgagacg
tcaataacctcgtgcccagaagatctgatgagcccgaggcccactttacttatgaagact
cccgcttccgtctttgcacgctctattgtcggcgccccacagagccctctgacggcacca
ttcactcctgacctggacagcccctttgcttctcccgccctgcgccggctcactgctcct
atggaccaattctcgccagggtttggcacagtgcaaagcccacacatcatgaggagagcc
ccaaagctctggtccacccccacagattcacaggtcaatggcagtcccccggcatcccct
ttctcagttcccagtcccaagcaggagccgtccaaaccaagtcgcctggctcagttcctc
cagaacagaaaagaacaggttaaacatttcttggccaaacgtgtgctgataatgtatttg
tttaacaagcttccagaagcttccagtcaagctctgtttgcagacagccaggctcacatc
tgggctttagaagggctgtcttaccttgttcaagcctccttctcagaagaccagtttggt
gttgtacagactacgttacccagcattctcggttgcatgctggtcttacaagaggcagta
gatcgacacttcaagctgcctcatgcctccagtaagcccgtcaggtcggccagcagcatg
ggagagtccgctcacaaaacactgcgctttgctctcagggccactctcaagactgccatc
tacaggataacaaccacttttggaaatcacttaaatgctgtccagatgtctgcagagcac
cggaaaagattgcagcagtttctggagtacaaggaataa
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